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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5aebA_

Fold library idPDB HeaderMoleculeTitle
c5aebA_PDB header: hydrolaseChain: A: PDB Molecule: lra-12;PDBTitle: crystal structure of the class b3 di-zinc metallo-beta-2 lactamase lra-12 from an alaskan soil metagenome.


Added to library: Sat Sep 19 08:34:47 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VKEPTVSNADWSKPYRPFRIAGNLYYIGTYDLACYLITTKQGNIIVNTGLAASALQIKNNIKALGFKLTD
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Known secondary structure (DSSP)







GGGT
B


TT
SBSSB

TT


SGGGTT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence TKILLTTQAHYDHLGAMAEIKKITGAKLMADEGDATVMADGGSSDYAFGGHGSMFEPIIADRLLHDKDTI
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Known secondary structure (DSSP)
S

STT

GGGTTTTT
TTTTTS

SS




S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QLGDTKLVMLHHPGHTKGSCSFLFDTKDEQRSYRILIANMPTIVIEKKFSEVSSYPGIAKDYAYTLQAMK
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Known secondary structure (DSSP) TT

SSSTT

SS







SS
GGG
TT
TT
 .........220.........230.........240.........250.........260....
Sequence NLSFDIWVASHASQFSMHSKHKPGDGYNPKSFMDRKGYDESLDKLQKEYEKHLN
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Known secondary structure (DSSP) T


SSBGGGGT

TT



GGGG

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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