Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a9aA_

Fold library idPDB HeaderMoleculeTitle
c5a9aA_PDB header: viral proteinChain: A: PDB Molecule: polyhedrin;PDBTitle: crystal structure of simulium ubiquitum cpv20 polyhedra


Added to library: Sat Sep 5 08:21:19 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNQPFNQPNVLQERQHLVNRQLVQGPNVQDAIKRVAIIFIYKNGSYRLIDYNAPEFINGYFNWRDMLYMD
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)








GGGSTT


TTS
SS
TGGGSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence KPAHSNRHKEFENQIRRPDHGDSHHPELFEYPVAIMISANGNICWENVRVEVENEDCLNHEDWRRARAWG
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)
GGGSTT





SS
TTS
SSSB
GGG

TTS
SSSSGGG

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PRCYKGSQMMKCSALGRFLYIPLRCQNESLKFKFPSRMSGGDNRYSSHSIGQVIQNNIIIRNNPLYLDNE
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TT
GGGS
SSS

SSS
B

BTTB
TTSTTT






S
 .........220.........230.........240..
Sequence GDLIDYMQAKNLCYIDSAAVVDCNGLAGDSEC
Predicted secondary structure





















SS confidence































Known secondary structure (DSSP) T


TTS

S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D