Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a8wH_

Fold library idPDB HeaderMoleculeTitle
c5a8wH_1.80PDB header: transferaseChain: H: PDB Molecule: methyl-coenzyme m reductase ii;


Added to library: Thu Feb 9 13:46:06 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PMYEDRVDLYGADGKLLEEDVPLEAVSPLKNPTIANLVSDVKRSVAVNLAGIEGSLRKAALGGKSNFIPG
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

S


TTS
GGGG
TTT

T

SSTT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence REVDLPIVENAEAIAEKIKKLVQTSEDDDTNIRLINNGQQILVQVPTTRMGVAADYTVSALVTGAAVVQA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)





TGGG
SSTTS

TTTT

TSSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence IIDEFDVDMFDANAVKTAVMGRYPQTVDFTGANLSTLLGPPVLLEGLGYGLRNIMANHVVAITRKNTLNA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) T

TTTTTTTTSSS
TT
S
SS

GGG
SSTT
GGG


TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SALSSILEQTAMFETGDAVGAFERMHLLGLAYQGLNANNLLFDLVKENGKGTVGTVIASLVERAIEDRVI
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TTTTSGGGTT
GGGTTT

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KVAKEMTSGYKMYEPADWALWNAYAATGLLAATIVNVGAARAAQGVASTVLYYNDILEYETGLPGVDFGR
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
TTS
SST
TTS


GGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence AMGTAVGFSFFSHSIYGGGGPGIFHGNHVVTRHSKGFALPCVAAAMCLDAGTQMFSVEKTSGLIGSVYSE
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTSSSSS

SGGG

TTSTTT
SSSSSS

S

SS
TTTT
 .........430.........440..
Sequence IDYFREPIVNVAKGAAEIKDQL
Predicted secondary structure


SS confidence





















Known secondary structure (DSSP) SSGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D