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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a8fC_

Fold library idPDB HeaderMoleculeTitle
c5a8fC_10.60PDB header: viral proteinChain: C: PDB Molecule: human saffold virus-3 vp2;


Added to library: Sat Jun 11 08:20:18 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDRVSSDTAGNTATNTQSTVGRLFGFGQRHKGKHPASCADTATDKVLAAERYYTIKLASWTKTQESFDHI
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Known secondary structure (DSSP)
TT
TTSS


GGG







TT

S

B


TTTSS

TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RVPLPHALAGENGGVFSSTLRRHYLCKCGWRIQVQCNASQFHAGSLLVFMAPEFDTSNHSTEVEPRADTA
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Known secondary structure (DSSP) TGGGSSGGGTT



TT
T


S

SSSS


TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FKVDANWQKHAQILTGHAYVNTTTKVNVPLALNHQNFWQWTTYPHQILNLRTNTTCDLEVPYVNVCPTSS
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Known secondary structure (DSSP) S


SS
B
SGGGTT


SS
TTGGGG



TT


GGGGGGSSTTT
S



SSSSB
 .........220.........230.........240.........250........
Sequence WTQHANWTLVIAVLTPLQYSQGSATTIEITASIQPVKPVFNGLRHTVV
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Known secondary structure (DSSP) GGG




TTS



S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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