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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a8dA_

Fold library idPDB HeaderMoleculeTitle
c5a8dA_1.65PDB header: hydrolaseChain: A: PDB Molecule: carbohydrate binding family 6;


Added to library: Sat Jul 30 14:22:08 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SAADYPIFSQRFTADPAAVVYNGRLYIYCSHDSDATPGQSTYNIPDITCISTDDLKNWTDHGEVFNAKRD
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Known secondary structure (DSSP)

TT

TTS

TT
S


SSS





SSSSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SRWASVSWAPSIVYRNNKFYLYYGNGGNGIGVAVSDSPTGPFKDPLPGPLVSWNTPGVQPAQNMWLFDPG
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Known secondary structure (DSSP)
SS
S

TT
TTS
SSTT


B

SSS
SB
TTSTTT
S
SS





 .........150.........160.........170.........180.........190.........200.........210
Sequence VFVDDDGQAYMYFGGNGQNNIRVIKLGNDMISTVGSAMTMSAPRFFEAAYMHKYNGKYYFSYASDFSQGA
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Known secondary structure (DSSP)
TTS

SSTT

TTSSS

TTTT
STTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SKIEYMMSDKPTTGFQYKGVILPQPPDNYSNNNHHAIVEYKGNWYVVYHNRTVAKQRGLDPVYQRNVCID
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Known secondary structure (DSSP)

SSSSS



SS

SSS


TT
TT



SS
TT
 .........290.........300..
Sequence QMFYNADGTIKQVVPTVDGLKQ
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Known secondary structure (DSSP)
TTSS

S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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