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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a5tM_

Fold library idPDB HeaderMoleculeTitle
c5a5tM_PDB header: hydrolaseChain: M: PDB Molecule: eukaryotic translation initiation factor 3 subunit m;PDBTitle: structure of mammalian eif3 in the context of the 43s2 preinitiation complex


Added to library: Sat Sep 12 08:18:44 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKDVESVMNSVVSLLLILE
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Known secondary structure (DSSP)


S
S
S
TTS
TT


SS

TTS
TTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELD
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Known secondary structure (DSSP) SS
TSST


SSSTT

TTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence QVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDP
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Known secondary structure (DSSP) TT


SSS
SSS

S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence NAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGM
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Known secondary structure (DSSP) TSTTTSSGGGTS
SSSSS
TTS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLN
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Known secondary structure (DSSP)
SS

TS
TSS
S


SSSS
S
S


S

T
 .........360.....
Sequence AWKQNLNKVKNSLLS
Predicted secondary structure

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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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