Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a5cD_

Fold library idPDB HeaderMoleculeTitle
c5a5cD_2.10PDB header: signaling proteinChain: D: PDB Molecule: lrrtm;


Added to library: Sat Feb 6 09:03:45 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MACPPKCRCEKLLFYCDSQGFHSVPNGLPSQLLGLSLRHNQLQSLPNGVFDKLTQLTWLHLDHNQLQSLP
Predicted secondary structure




















































SS confidence





































































Known secondary structure (DSSP)



TT
TT

SS

SS

TT

TT
S

SS





TTTTTT
TT



SS





 .........80.........90.........100.........110.........120.........130.........140
Sequence NGVFDKLTKLTELILSSNQLQSLPNGTFDKLTNLQNLDLSFNQLQSLPNGVFDKLTNLQTLHLRSNQLQS
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP) TTTTTT
TT



SS





TTTTTT
TT



SS





TTTTTT
TT



SS



 .........150.........160.........170.........180.........190.........200.........210
Sequence LPNGVFDKLTSLTFLDLSTNQLQSLPNGVFDKLTNLRELHLEHNQLQSLPNGVFDKLTSLTTLFLQWNQL
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP)

TTTTTT
TT



SS





TTTTTT
TT



SS

S


TTTTTT
TT


TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence QSLPNGVFDKLTNLEKLDLTGNQLQSLPNGVFDKLTNLKILLLDNNQLQSLPNGVFDKLKSLTTVGLSGN
Predicted secondary structure


























































SS confidence





































































Known secondary structure (DSSP)



TTTTTT
TT


TTS





TTTTTT
TT


TTS

S


TTTTTT
TT




S
 .........290.........300.........310.........320.........
Sequence LWECSPRVCALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLC
Predicted secondary structure
























SS confidence
















































Known secondary structure (DSSP)

B
SGGGT
SSB
SS

B

BSGGGTTSBTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D