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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a4aA_

Fold library idPDB HeaderMoleculeTitle
c5a4aA_PDB header: rna-binding proteinChain: A: PDB Molecule: maternal effect protein oskar;PDBTitle: crystal structure of the osk domain of drosophila oskar


Added to library: Sat Jul 25 08:23:27 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GHTSGTYNDSLLTINSDYDAYLLDFPLMGDDFMLYLARMELKCRFRRHERVLQSGLCVSGLTINGARNRL
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Known secondary structure (DSSP)
TTTT
S
GGGG


TTTS
TTSS




TT
SS
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence KRVQLPEGTQIIVNIGSVDIMRGKPLVQIEHDFRLLIKEMHNMRLVPILTNLAPLGNYCHDKVLCDKIYR
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Known secondary structure (DSSP) T



TT


TT

TT





GGGTT
 .........150.........160.........170.........180.........190.........200........
Sequence FNKFIRSECCHLKVIDIHSCLINERGVVRFDCFQASPRQVTGSKEPYLFWNKIGRQRVLQVIETSLEY
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Known secondary structure (DSSP) TTTS


SGGGB
TTS
B
GGGB
SS
B

SS
SS
B

B
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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