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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a3fD_

Fold library idPDB HeaderMoleculeTitle
c5a3fD_PDB header: endocytosisChain: D: PDB Molecule: dynamin 3;PDBTitle: crystal structure of the dynamin tetramer


Added to library: Sat Aug 29 08:26:08 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVT
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Known secondary structure (DSSP)

SSTTS
TTTS




BTTS
TS

S


SS
S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SKAEYAEFLHCKGKKFTDFDEVRLEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITPPDI
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Known secondary structure (DSSP)
SS
TTSTT

B


SSTT


S

TT

S


B

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EYQIREMIMQFITRENCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLEN
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Known secondary structure (DSSP) TSTT

SSS
GGG

TT
SS
GGGS
TT


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSHPAYRHIADRMGTPHLQKVLNQQLTNHIRDT
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Known secondary structure (DSSP) SSS

TT






B
TTS
B

TTTGGGGGG
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPNFRNKLQGQLLSIEHEVEAPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTLELSGGASINRIFHERF
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Known secondary structure (DSSP)





SS


SSS

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence PFEIVKMEFNEKELRREISYAIPDMAFEAIVKKQIVKLKGPSLKSVDLVIQELINTVKKCTKKLANFPRL
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Known secondary structure (DSSP) S



TTGGGGTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence CEETERIVANHIREREGKTKDQVLLLIDIQVSYINTNHEDFIGPQLERQVETIRNLVDSYMSIINKCIRD
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Known secondary structure (DSSP)


S

TTS


 .........500.........510.........520.........530.........540.........550....
Sequence LIPKTIMHLMINNVKDFINSELLAQLYSSEDQNTLMEESAEQAQRRDEMLRMYQALKEALGIIG
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Known secondary structure (DSSP) TS
T




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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