Fold library entry viewer: c5a1vL_

Added to library: Sat Jul 11 10:12:41 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	P	L	R	L	D	I	K	R	K	L	T	A	R	S	D	R	V	K	S	V	D	L	H	P	T	E	P	W	M	L	A	S	L	Y	N	G	S	V	C	V	W	N	H	E	T	Q	T	L	V	K	T	F	E	V	C	D	L	P	V	R	A	A	K	F	V	A	R	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S									S	S	S	S							S	S	S							T	T	T	T										S	S									T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	V	V	T	G	A	D	D	M	Q	I	R	V	F	N	Y	N	T	L	E	R	V	H	M	F	E	A	H	S	D	Y	I	R	C	I	A	V	H	P	T	Q	P	F	I	L	T	S	S	D	D	M	L	I	K	L	W	D	W	D	K	K	W	S	C	S	Q	V	F	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S							T	T	T	T										S	S									S	S	S	S							S	S	S							T	T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	T	H	Y	V	M	Q	I	V	I	N	P	K	D	N	N	Q	F	A	S	A	S	L	D	R	T	I	K	V	W	Q	L	G	S	S	S	P	N	F	T	L	E	G	H	E	K	G	V	N	C	I	D	Y	Y	S	G	G	D	K	P	Y	L	I	S	G	A	D	D	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S									S	S		T	T							T	T	T							T	T		S	S									S	S										S	S	S									T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	K	I	W	D	Y	Q	N	K	T	C	V	Q	T	L	E	G	H	A	Q	N	V	S	C	A	S	F	H	P	E	L	P	I	I	I	T	G	S	E	D	G	T	V	R	I	W	H	S	S	T	Y	R	L	E	S	T	L	N	Y	G	M	E	R	V	W	C	V	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T		S									S	S									S	S	S	S							T	T	S							T	T	T										S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	G	S	N	N	V	A	L	G	Y	D	E	G	S	I	I	V	K	L	G	R	E	E	P	A	M	S	M	D	A	N	G	K	I	I	W	A	K	H	S	E	V	Q	Q	A	N	L	K	A	M	G	D	T	E	I	K	D	G	E	R	L	P	L	A	V	K	D	M	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S							S	S								S			S				B			S	S	S			B	B	S	S	S	T	T	S		S	S	S		B									T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	C	E	I	Y	P	Q	T	I	Q	H	N	P	N	G	R	F	V	V	V	C	G	D	G	E	Y	I	I	Y	T	A	M	A	L	R	N	K	S	F	G	S	A	Q	E	F	A	W	A	H	D	S	S	E	Y	A	I	R	E	S	N	S	I	V	K	I	F	K	N	F	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S						S	S	S	S							T	T							T	T	T										S						S	S	S	S							S	S	S	S						T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	K	S	F	K	P	D	F	G	A	E	S	I	Y	G	G	F	L	L	G	V	R	S	V	N	G	L	A	F	Y	D	W	E	N	T	E	L	I	R	R	I	E	I	Q	P	K	H	I	F	W	S	D	S	G	E	L	V	C	I	A	T	E	E	S	F	F	I	L	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				S	S			S					S	S	S						T	T							T	T	T								S	S									S	S	S	S							S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	S	E	K	V	L	A	A	Q	E	T	H	E	G	V	T	E	D	G	I	E	D	A	F	E	V	L	G	E	I	Q	E	I	V	K	T	G	L	W	V	G	D	C	F	I	Y	T	S	S	V	N	R	L	N	Y	Y	V	G	G	E	I	V	T	I	A	H	L	D	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T		S		T	T	T			S	S	S								S	S			S	S					T	T							T	T	S							T	T									S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	M	Y	L	L	G	Y	I	P	K	D	N	R	L	Y	L	G	D	K	E	L	N	I	V	S	Y	S	L	L	V	S	V	L	E	Y	Q	T	A	V	M	R	R	D	F	S	M	A	D	K	V	L	P	T	I	P	K	E	Q	R	T	R	V	A	H	F	L	E	K	Q	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T							S	S	S	S																				T									G	G	G	S																S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	Q	Q	A	L	T	V	S	T	D	P	E	H	R	F	E	L	A	L	Q	L	G	E	L	K	I	A	Y	Q	L	A	V	E	A	E	S	E	Q	K	W	K	Q	L	A	E	L	A	I	S	K	C	Q	F	S	L	A	Q	E	C	L	H	H	A	Q	D	Y	G	G	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S												T											S	S	S																T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	L	A	T	A	S	G	N	A	S	M	V	N	K	L	A	E	G	A	E	R	D	G	K	N	N	V	A	F	M	S	Y	F	L	Q	G	K	L	D	A	C	L	E	L	L	I	R	T	G	R	L	P	E	A	A	F	L	A	R	T	Y	L	P	S	Q	V	S	R	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S	S		T	T		S	G	G	G	T	T					T											S	S	S			T	T									T												S		S	S	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.
Sequence	K	L	W	R	E	N	L	S	K	V	N	Q	K	A	A	E	S	L	A	D	P	T	E	Y	E	N	L	F	P	G	L	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S	S	S				S	S	S	S	S	S	S			T	T	T			-

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PDB structure

FASTA sequence

Hidden Markov model

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