Fold library entry viewer: c5a1vG_

Added to library: Sat Jul 11 08:28:04 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	S	E	P	P	S	E	I	S	L	K	N	D	L	E	K	G	D	V	K	S	K	T	E	A	L	K	K	V	I	I	M	I	L	N	G	E	K	L	P	G	L	L	M	T	I	I	R	F	V	L	P	L	Q	D	H	T	I	K	K	L	L	L	V	F	W	E	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S										S	S	S																							G	G	G									S	S														T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	K	T	T	P	D	G	R	L	L	H	E	M	I	L	V	C	D	A	Y	R	K	D	L	Q	H	P	N	E	F	I	R	G	S	T	L	R	F	L	C	K	L	K	E	A	E	L	L	E	P	L	M	P	A	I	R	A	C	L	E	H	R	H	S	Y	V	R	R	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T			T	T	T		S		T	T		T	T	S	S	S	S					T		S	S																	S	T	T					G	G	G	G	G	G	G	S	S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	A	I	Y	T	I	Y	R	N	F	E	H	L	I	P	D	A	P	E	L	I	H	D	F	L	V	N	E	K	D	A	S	C	K	R	N	A	F	M	M	L	I	H	A	D	Q	D	R	A	L	D	Y	L	S	T	C	I	D	Q	V	Q	T	F	G	D	I	L	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S	S	T	T	S	S	S		S	S	S		S	S									S	S	S						S	S	S	S														T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	I	V	E	L	I	Y	K	V	C	H	A	N	P	S	E	R	A	R	F	I	R	C	I	Y	N	L	L	Q	S	S	S	P	A	V	K	Y	E	A	A	G	T	L	V	T	L	S	S	A	P	T	A	I	K	A	A	A	Q	C	Y	I	D	L	I	I	K	E	S	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				S	S	S			S	S														S			S	S	S		S	S			T	T					T	G	G	G		S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	V	K	L	I	V	L	D	R	L	V	E	L	K	E	H	P	A	H	E	R	V	L	Q	D	L	V	M	D	I	L	R	V	L	S	T	P	D	L	E	V	R	K	K	T	L	Q	L	A	L	D	L	V	S	S	R	N	V	E	E	L	V	I	V	L	K	K	E	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T					S		S	S	S	S		S			S	S		S	S		S							T	S		S	S	S	S																S	S	S	S	S												S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	T	N	N	V	S	E	H	E	D	T	D	K	Y	R	Q	L	L	V	R	T	L	H	S	C	S	V	R	F	P	D	M	A	A	N	V	I	P	V	L	M	E	F	L	S	D	S	N	E	A	A	A	A	D	V	L	E	F	V	R	E	A	I	Q	R	F	D	N	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S	S	S			S																				S															T	T																				S	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	M	L	I	V	E	K	M	L	E	V	F	H	A	I	K	S	V	K	I	Y	R	G	A	L	W	I	L	G	E	Y	C	S	T	K	E	D	I	Q	S	V	M	T	E	V	R	R	S	L	G	E	I	P	I	V	E	S	E	I	K	K	E	A	G	E	L	K	P	E	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T	T	T	T	S	S			S														T	T	T	T													T	S		S			T	T									S	S		S	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	T	V	G	P	V	Q	K	L	V	T	E	M	G	T	Y	A	T	Q	S	A	L	S	S	S	R	P	T	K	K	E	E	D	R	P	P	L	R	G	F	L	L	D	G	D	F	F	V	A	A	S	L	A	T	T	L	T	K	I	A	L	R	Y	V	A	L	V	Q	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S														T					S	T	T	S		S			S		S	S	T	T			S								S	S	T	T		S	S	S	S						T	S		S	S				T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	K	Q	N	S	F	V	A	E	A	M	L	L	M	A	T	I	L	H	L	G	K	S	D	P	V	Y	A	E	A	Y	V	H	V	N	Q	Y	D	I	V	L	D	V	L	V	V	N	Q	T	S	D	T	L	Q	N	C	T	L	E	L	A	T	L	G	D	L	K	L	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S				S															-													T	T												S	S	S				S									S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	P	S	P	L	T	L	A	P	H	D	F	A	N	I	K	A	N	V	K	V	A	S	T	E	N	G	I	I	F	G	N	I	V	Y	D	V	S	G	A	A	S	D	R	N	C	V	V	L	S	D	I	H	I	D	I	M	D	Y	I	Q	P	A	T	C	T	D	A	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T											S						S	S			S	S								S		S	S	S	S							S				G	G	G	G	S		B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	Q	M	W	A	E	F	E	W	E	N	K	V	T	V	N	T	N	M	T	D	L	N	D	Y	L	Q	H	I	L	K	S	T	N	M	K	C	L	T	P	E	K	A	L	S	G	Y	C	G	F	M	A	A	N	L	Y	A	R	S	I	F	G	E	D	A	L	A	N	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S									S	S			S		T	T	T									T	T					S						S	S	S													T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.
Sequence	I	E	K	P	V	H	Q	G	P	D	A	A	V	T	G	H	I	R	I	R	A	K	S	Q	G	M	A	L	S	L	G	D	K	I	N	L	S	Q	K	K	T	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S		S	S	S	S									S	S	S	S	S							T	T	S								-

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PDB structure

FASTA sequence

Hidden Markov model

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