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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a1fA_

Fold library idPDB HeaderMoleculeTitle
c5a1fA_PDB header: oxidoreductaseChain: A: PDB Molecule: lysine-specific demethylase 5b, lysine-specificPDBTitle: crystal structure of the catalytic domain of plu1 in complex with2 n-oxalylglycine


Added to library: Sat May 9 08:25:11 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNEL
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Known secondary structure (DSSP)






B




T
TTTS


TT







TTT




TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EAQTRVRDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGF
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Known secondary structure (DSSP)





TS
GGGS

SS




TTT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PVRDSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHW
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Known secondary structure (DSSP)





TTSTTSTT
GGGG

S

S

TT


GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence GEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFP
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Known secondary structure (DSSP) S


GGG
GGGGS

SSGGG




TT



TT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence RAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK
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Known secondary structure (DSSP) T

SSS

TTTT


SS
TTGGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELC
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Known secondary structure (DSSP) TT



GGGS
GGGSB
TTT

B

STTSTT

B
TT
GGGS
 .........430.........440.........450
Sequence SCPPYKYKLRYRYTLDDLYPMMNALKLRAE
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Known secondary structure (DSSP) SS
GGGSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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