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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a10A_

Fold library idPDB HeaderMoleculeTitle
c5a10A_PDB header: immune systemChain: A: PDB Molecule: thiocyanate forming protein;PDBTitle: the crystal structure of ta-tfp, a thiocyanate-forming protein2 involved in glucosinolate breakdown (space group c2)


Added to library: Sat Aug 29 08:34:09 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPEFMARTLQGEWMKVEQKGGQVPAPRSSHGIAVIGDKLYCFGGEDPPYESIDNDLYVFDFNTHTWSIAP
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Known secondary structure (DSSP)

SS


SS




S




BS
TT

B
STT
B




TTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence ANGDVPKTRVLGTRMVAVGTKLYVFGGRNKQLEFEDFYSYDTVKEEWKFLTKLDEKGGPEARTFHSMTSD
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Known secondary structure (DSSP)

BS

SS

BS
TT

B
TT

B

TTTT
TT
TTS


S

 .........150.........160.........170.........180.........190.........200.........210
Sequence ENHVYVFGGVSKGGLNATPFRFRTIEAYNIAEGKWAQLPDPGEDFEKRGMAGFLVVQGKLWVFYGFATAN
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Known secondary structure (DSSP) SS



BTTB


B


TTTT




TTS

S
TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DPKIPTLYGSQDYESNRVHCYDPATQKWTEVETTGFEKPSRRSCFAHAAVGKYIIIFGGEIERDPEAHQG
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Known secondary structure (DSSP)
TTS

BTTB

TTTT


B
TT


S
BS
TT


BTTBTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PGTLSREGFALDTETLVWERYEGGPIKPSNRGWVASTTTTINGKKGLLVHGGKLMTNERTDEMYFFAVNS
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Known secondary structure (DSSP)




TTT
B

SS



SS
TT

TTS
B



S
 ..
Sequence ST
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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