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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a0tA_

Fold library idPDB HeaderMoleculeTitle
c5a0tA_PDB header: hydrolase/rnaChain: A: PDB Molecule: ribonuclease j;PDBTitle: catalysis and 5' end sensing by ribonuclease rnase j of the2 metallo-beta-lactamase family


Added to library: Sat Aug 22 08:36:30 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHPHPELGRPPALPKGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGIDLILPDFTSIR
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Known secondary structure (DSSP)



TT

S




TT
SBSSSSS
TT



B

SS

TT
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence DRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQEHRIRPYTLEVAEGHRERVGP
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Known secondary structure (DSSP) TTGGG
S

TTTT
TT


TT





TT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDGRLTDLHAFARLSEEGIDLLLADSTNAEV
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Known secondary structure (DSSP) B
SSTTTT

S
B

SS
TT








TBTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PGFVPPERDISNVLRQVFANARKRIIVASFASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGY
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Known secondary structure (DSSP)
S



TT

S


TT
TT
STS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LKVPPGLVVDVKTLDDLPDSEVVLVCTGSQGEPMAALSRMANRDHQIRIVNGDTVILASSLIPGNENAVY
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Known secondary structure (DSSP) S


TTSB

GGGGGGS
GGGS
TT

TTSTT
SSS


TT

S


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence RVINGLTRWGANVVHKGNAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDR
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Known secondary structure (DSSP) TT

TTTS




SS
B

SSSB
TT

GGG
 .........430.........440.........450....
Sequence IVIAEDGVVVDLVEGKAKITGKVQAGYVYVDGLS
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Known secondary structure (DSSP) B



TTTT




SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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