PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5a0sA_

Fold library id	PDB Header	Molecule	Title
c5a0sA_	PDB header: hydrolase	Chain: A: PDB Molecule: zinc metalloprotease zmp1;	PDBTitle: apo-structure of metalloprotease zmp1 variant e143a from2 clostridium difficile

Links to external resources
Added to library: Sat Aug 8 08:26:25 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D S T T I Q Q N K D T L S Q I V V F P T G N Y D K N E A N A M V N R L A N I D G K Y L N A L K Q N N L K I K L L S G K L T D E K E Y A Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S S
T T S
T T
S S
G G G S G G G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K G V V P K G W E G T G K T W D D V P G L G G S T V A L R I G F S N K G K G H D A I N L E L H A T A H A I D H I V L N D I S K S A Q F K Q I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S S
S
G G G
S S S T T
B T T S S S
S S B T T S S S G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . .

Sequence F A K E G R S L G N V N Y L G V Y P E E F F A E S F A Y Y Y L N Q D T N S K L K S A C P Q T Y S F L Q N L A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
T T T T T T
S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	S	T	T	I	Q	Q	N	K	D	T	L	S	Q	I	V	V	F	P	T	G	N	Y	D	K	N	E	A	N	A	M	V	N	R	L	A	N	I	D	G	K	Y	L	N	A	L	K	Q	N	N	L	K	I	K	L	L	S	G	K	L	T	D	E	K	E	Y	A	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T					S	S															T	T	S											T	T							S	S		G	G	G	S	G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	G	V	V	P	K	G	W	E	G	T	G	K	T	W	D	D	V	P	G	L	G	G	S	T	V	A	L	R	I	G	F	S	N	K	G	K	G	H	D	A	I	N	L	E	L	H	A	T	A	H	A	I	D	H	I	V	L	N	D	I	S	K	S	A	Q	F	K	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T				T	T		S	S		S			G	G	G						S	S	S					T	T			B	T	T	S	S	S		S	S	B													T	T	S	S	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Sequence	F	A	K	E	G	R	S	L	G	N	V	N	Y	L	G	V	Y	P	E	E	F	F	A	E	S	F	A	Y	Y	Y	L	N	Q	D	T	N	S	K	L	K	S	A	C	P	Q	T	Y	S	F	L	Q	N	L	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T	S		T	T	T	T	T	T															S																							T