PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4zxsD_

Fold library id	PDB Header	Molecule	Title
c4zxsD_	PDB header: viral protein	Chain: D: PDB Molecule: virion egress protein ul31;	PDBTitle: hsv-1 nuclear egress complex

Links to external resources
Added to library: Sat Nov 14 08:16:37 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L H E R Q R Y R G L F A A L A Q T P S E E I A I V R S L S V P L V K T T P V S L P F C L D Q T V A D N C L T L S G M G Y Y L G I G G C C P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S
S S G G G S
T T T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence C N A G A T S R E A L I L A F V Q Q I N T I F E H R A F L A S L V V L A D R H N A P L Q D L L A G I L G Q P E L F F V H T I L R G G G A C D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T
G G G T T
T
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P R L L F Y P D P T Y G G H M L Y V I F P G T S A H L H Y R L I D R M L T A C P G Y R F V A H V W Q S T F V L V V R R N A E K P T V S A A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S
S S
T T T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 .

Sequence I Y C K M R D I S F D G G L M L E Y Q R L Y A T F D E F P P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	H	E	R	Q	R	Y	R	G	L	F	A	A	L	A	Q	T	P	S	E	E	I	A	I	V	R	S	L	S	V	P	L	V	K	T	T	P	V	S	L	P	F	C	L	D	Q	T	V	A	D	N	C	L	T	L	S	G	M	G	Y	Y	L	G	I	G	G	C	C	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																											S		S								S	S			G	G	G	S		T	T							T	T							T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	N	A	G	A	T	S	R	E	A	L	I	L	A	F	V	Q	Q	I	N	T	I	F	E	H	R	A	F	L	A	S	L	V	V	L	A	D	R	H	N	A	P	L	Q	D	L	L	A	G	I	L	G	Q	P	E	L	F	F	V	H	T	I	L	R	G	G	G	A	C	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	G	G	G	T	T		G	G	G														T	T												T														S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	R	L	L	F	Y	P	D	P	T	Y	G	G	H	M	L	Y	V	I	F	P	G	T	S	A	H	L	H	Y	R	L	I	D	R	M	L	T	A	C	P	G	Y	R	F	V	A	H	V	W	Q	S	T	F	V	L	V	V	R	R	N	A	E	K	P	T	V	S	A	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	S	S									S	S																	T	T									T	T										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Sequence	I	Y	C	K	M	R	D	I	S	F	D	G	G	L	M	L	E	Y	Q	R	L	Y	A	T	F	D	E	F	P	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S				S														T	S