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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zppA_

Fold library idPDB HeaderMoleculeTitle
c4zppA_PDB header: cell adhesionChain: A: PDB Molecule: mcg133388, isoform cra_f;PDBTitle: crystal structure of protocadherin gamma c5 ec1-3


Added to library: Sat Oct 31 09:06:45 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QLRYSVVEESEPGTLVGNVAQDLGLKGTDLLSRRLRLGSEENGRYFSLSLVSGALAVSQKIDRESLCGAS
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Known secondary structure (DSSP)
TT

TT

TT

TTTT

SSGGGGS
TTT

SS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TSCLLPVQVVTEHPLELTRVEVEILDLNDNSPSFATPDREMRISESAAPGARFPLDSAQDPDVGTNTVSF
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Known secondary structure (DSSP) S

TTTT






B
S
STT

TT




B



GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YTLSPNSHFSLHVKTLKDGKLFPELVLEQQLDRETQARHQLVLTAVDGGTPARSGTSLISVIVLDVNDNA
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Known secondary structure (DSSP)


SS
SSS

S


TTT
SS
SS







 .........220.........230.........240.........250.........260.........270.........280
Sequence PTFQSSVLRVGLPENTPPGTLLLRLNATDPDEGTNGQLDYSFGDHTSETVKNLFGLDPSSGAIHVLGPVD
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Known secondary structure (DSSP)
S
S

TT

TT




S
GGGG

TT


TTT

S


 .........290.........300.........310.
Sequence FEESNFYEIHARARDQGQPAMEGHCVIQVDV
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Known secondary structure (DSSP) TTT
SSSSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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