Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zpjA_

Fold library idPDB HeaderMoleculeTitle
c4zpjA_PDB header: transport proteinChain: A: PDB Molecule: extracellular ligand-binding receptor;PDBTitle: abc transporter substrate-binding protein from sphaerobacter2 thermophilus


Added to library: Sat May 23 08:29:48 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPIRIGVLLTLSGPQGVNGEGNLRGLTLALDQAGXQFGGRPVELIIEDSAGQPEQAITKTRQLIERDRVH
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)



SSTTTTTTT
TT
TS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LIAGITLSNEAAAVRDILVQAEXPTIVTNAGLQALTRDPAXRSPYLFRVSFANGQYDAPAADYAYETLGY
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)


TT

SS


TSTTT

TTSS

TTTTTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence RRXVLHAADYAAGHEEXAAFRSRFEQAGGEIVDEVVAPIGTQDFGPYLQRIEQAAAEADAVFAFHGTSTD
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
SSTT

TT
S

GGG
S

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AIRFLVQYQEFGLKDSIPLIPSGADVDQSILPEIGDAALGLVSGTLYTAYNDTPESQEFVEAFTARHEGI
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TT
TTTS

GGGG
TTTGGGGTT
S

TT

STTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPGLVDYAGYIGGRVIAEALTAIDGEVENKEALLEALKAVEFTGPAGNFRFHPESQGPVTTILLCRVEQL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)


TTT
TT

TT
TTT
S
 .........360.........370.
Sequence DDGTYANIVVDRIPDFDDLSF
Predicted secondary structure










SS confidence




















Known secondary structure (DSSP) TTS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D