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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zp0A_

Fold library idPDB HeaderMoleculeTitle
c4zp0A_PDB header: transport proteinChain: A: PDB Molecule: multidrug transporter mdfa;PDBTitle: crystal structure of e. coli multidrug transporter mdfa in complex2 with deoxycholate


Added to library: Sat Aug 22 10:16:52 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDR
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Known secondary structure (DSSP)

S
SSTTTTT

TTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIRESFEEAVCIKITALMAN
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Known secondary structure (DSSP)
GGG

SGGGTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKN
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Known secondary structure (DSSP) TTS





SSTT



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GRFVAGALALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLI
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Known secondary structure (DSSP) TTTS


GGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQM
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Known secondary structure (DSSP)
TT
TT

S
 .........360.........370.........380.........390..
Sequence LIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMVIFLK
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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