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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zn3A_

Fold library idPDB HeaderMoleculeTitle
c4zn3A_2.30PDB header: transcriptionChain: A: PDB Molecule: transcription elongation factor spt5;


Added to library: Sat Mar 19 08:18:59 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MIFAVRTMVGQEKNIAGLMASRAEKEQLDVYSILASESLKGYVLVEAETKGDVEELIKGMPRVRGIVPGT
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Known secondary structure (DSSP)

TT
TT



TTSTTSSTT
TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IAIEEIEPLLTPKKIIENIEKGDVVEIIAGPFKGERAKVIRVDKHKEEVTLELENAAVPIPITLPVEGVK
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Known secondary structure (DSSP)

GGGGS








TT

SSTTTT
TTTTS
TTS
S
GGG
 .......
Sequence IVSKHKD
Predicted secondary structure


SS confidence






Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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