Fold library entry viewer: c4zm6A_

Added to library: Sat Dec 12 08:42:15 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	L	D	K	E	I	G	Q	L	L	M	C	G	F	D	G	L	E	P	T	P	G	I	I	D	L	I	E	N	H	N	L	G	S	I	I	L	F	S	R	N	I	A	T	P	K	Q	V	Q	K	L	T	H	S	L	Q	Q	I	A	R	N	A	G	H	K	R	P	L	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	G	G	G	G	G						S	S	S	S																					T	T	T																					T	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	V	D	Q	E	N	G	V	V	R	R	L	G	D	S	G	T	Y	L	P	G	N	M	A	L	G	A	L	G	S	S	T	A	A	R	N	V	A	M	A	I	S	K	E	L	L	T	L	G	M	N	W	N	L	A	P	V	L	D	V	N	N	N	P	L	N	P	V	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S			S		T	T	S	S													T																				T								B							T	T		S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	R	S	Y	G	Q	D	P	E	L	V	A	R	M	G	L	A	Q	V	E	G	Y	Q	R	G	K	V	A	T	S	I	K	H	F	P	G	H	G	D	T	A	T	D	S	H	L	D	V	P	V	I	N	K	T	L	E	E	L	D	K	T	E	L	V	P	F	K	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			S																			T	T		B							T				S		S	S		T	T	T	S			B											T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	A	G	G	I	A	C	P	T	S	V	M	V	G	H	M	L	L	P	H	F	N	K	D	V	V	S	S	I	A	P	E	I	V	R	D	L	L	R	R	R	F	G	Y	K	G	V	I	I	T	D	C	L	E	M	D	A	V	K	E	T	V	G	T	P	K	G	A	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S	T	T	S		S								B	B	T	T	T	B	S	S	S		G	G	G		T	T	T									S				S					S		T	T	S					T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	L	Q	A	G	N	D	M	A	M	I	S	H	T	L	A	F	Q	K	D	A	F	K	V	L	Y	S	A	L	Q	E	G	Q	L	D	K	D	E	I	R	Q	S	L	Q	R	V	A	Q	L	K	D	Q	F	L	N	W	D	D	V	L	Q	Q	A	D	L	K	T	M	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		S	B					S		T	T																T		S																															G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	A	H	A	T	L	S	K	E	L	Y	D	R	V	P	T	V	V	T	N	R	K	N	T	L	P	I	R	P	A	Q	T	D	K	I	L	F	L	A	A	H	V	P	E	K	E	P	F	N	S	F	H	A	S	L	L	K	R	H	T	N	L	E	Y	I	I	Y	N	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T								T	T				S					T	T														S	T	T													S								S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	P	D	L	S	Q	K	I	Q	E	A	D	W	V	I	I	G	T	A	N	A	N	L	Y	P	F	Q	V	R	M	V	Q	Q	A	Q	K	L	A	K	R	L	V	V	A	A	V	M	N	P	Y	D	Q	M	C	F	P	Q	V	D	T	Y	L	V	T	Y	E	Y	T	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S							S	S	G	G	G																S	S							S		G	G	G	G	G	G		T	T		S						S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	H	E	A	A	V	R	L	I	F	G	E	I	E	T	R	S	R	L	P	I	S	I	P	N	V	D	D	A	I	A	P	A	T	F	I	V	D	D	Y	R	N	D	D	D	L	D	H	V	T	A	M	W	D	D	I	F	G	K	D	W	P	L	R	K	D	K	I	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S							S	S			T	T																																	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	L	Q	R	A	K	L	Q	K	H	K	V	A	R	D	S	Q	G	K	I	V	G	F	V	A	T	Q	I	V	V	V	D	N	K	K	H	G	Q	L	M	L	L	M	V	S	P	S	Y	Q	G	K	G	V	G	T	L	L	H	D	A	A	L	E	H	F	R	E	Q	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		T	T									T	T															T	T													G	G	G	T	T	S	S																	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	C	I	K	L	G	S	T	Y	P	R	F	F	P	G	V	P	D	D	D	A	Q	S	R	K	A	Q	A	F	F	S	K	K	G	W	R	M	D	D	N	L	V	H	D	L	I	G	D	L	Q	D	Y	K	V	P	D	K	I	Q	A	R	M	L	K	E	K	I	W	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		S	S	S		S		S	S				S	S														T					S	S										T	T															T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	I	K	P	S	E	T	W	E	L	Y	A	F	Q	Q	R	N	F	P	H	W	L	S	T	Y	Q	H	H	V	E	L	G	D	Y	Q	D	L	I	V	A	R	Q	D	D	E	N	G	R	V	I	A	S	L	I	L	N	T	T	H	V	S	H	E	Y	R	S	D	L	I	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G													G	G	G											T		G	G	G							S	S	T	T	S											T	T	T	S		T	T			S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	T	D	D	K	L	F	G	E	R	S	G	G	M	A	C	V	G	V	A	Q	E	E	R	G	R	G	I	G	I	G	I	V	A	H	A	N	W	L	L	K	Q	R	G	V	T	K	S	Y	V	D	W	V	E	L	L	D	F	Y	S	R	V	G	Y	K	T	W	R	S	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T	S	S		S	S											S	T	T	T	T	S	S																T	T																	T	T	T
	.	.	.	.
Sequence	L	G	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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