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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zktD_

Fold library idPDB HeaderMoleculeTitle
c4zktD_PDB header: hydrolase/toxinChain: D: PDB Molecule: botulinum neurotoxin type e, nontoxic-nonhemagglutininPDBTitle: crystal structure of the progenitor m complex of clostridium botulinum2 type e neurotoxin


Added to library: Sat Dec 26 08:17:53 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KINGNLNIDSPVDNKNVAIVRSRDVFFKAFQVAPNIWIVPERYYGESLKINEDQKFDGGIYDSNFLSTNN
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Known secondary structure (DSSP)





BTTB


SSSS








SSS

TTS
SS

TTT

TT



SSSS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EKDDFLQATIKLLQRINNNVVGAKLLSLISTAIPFPYENNTEDYRQTNYLSSKNNLVIFGPGSNIIKNNV
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Known secondary structure (DSSP) STT





SSS



S


SSSS





SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence IYYKKEYAESGMGTMLEIWFQPFLTHKYDEFYVDPALELIKCLIKSLYYLYGIKPNDNLNIPYRLRNEFN
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Known secondary structure (DSSP) S
STS





STT

TT



SS
TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SLEYSELDMIDFLISGGIDYKLLNTNPYWFIDKYFIDTSKNFEKYKNDYEIKIKNNNYIANSIKLYLEQK
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Known secondary structure (DSSP) S

TTGGGGTS
SS
S


TTTTTTT
SSS



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FKINVKDIWELNLSYFSKEFQIMMPERYNNALNHYYRKEYYVIDYFKNYNINGFKNGQIKTKLPLSKYNK
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Known secondary structure (DSSP) T


ST

T




SSTTSGGGT





TTTSB
SSSBTTTTTTT


B
GGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence EIINKPELIVNLINNTVLMKSNIYGDGLKGTNFYSNYIIPYNHSINYSYLDNVNIEEIEKIPPINDEDIY
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Known secondary structure (DSSP) T




S




S


S
B



GGG
B










TTTT

SSS




S

 .........430.........440.........450.........460.........470.........480.........490
Sequence PYRKNADTFIPVYNITKEINTTTPLPVNYLQAQMIDSNDINLSSDFLKVISSLVYSFLNNTMDYLEFIKY
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Known secondary structure (DSSP)

S













SS




SS


S
T





TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DKPIDTDKKYYKWLKAIFRNYSLDITETQEISNDTKIIPWIGRALNILNTNNSFVEEFKNLGPISLINKK
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Known secondary structure (DSSP) S



S







TTSSTTSS

GGGS
SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence ENITIPKIKIPSSMLNFKDLSENLFNIYCKNNFYLKKIYYNFLDQWWTQYYSQYFDLICMASKSVLAQEK
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Known secondary structure (DSSP)





B



GGG


T
 .........640.........650.........660.........670.........680.........690.........700
Sequence LIKKLIQKQLRYLMENSNISSTNLILINLTTTNTLRDISNQSQIAINNIDKFFNNAAMCVFENNIYPKFT
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Known secondary structure (DSSP) SS



TTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence SFMEQCIKNINKSTKEFILKCTNINETEKSHLIMQNSFSNLDFDFLDIQNMKNLFNSYTELLIKEQTSPY
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Known secondary structure (DSSP)
TTS
T


GGGG



T

T
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence ELSLYAFQEQDNNVIGDTSGKNTLVEYPKDIGLVYGINNNAIHLTGANQNIKFTNDYFENGLTNNFSIYF
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Known secondary structure (DSSP)
SSSSS
SS


TT

SSS

SS


GGGG

SS

 .........850.........860.........870.........880.........890.........900.........910
Sequence WLRNLKQNTIKSKLIGSKEDNCGWEIYFENDGLVFNIIDSNGNEKNIYLSNISNNSWHYIVISINRLKDQ
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Known secondary structure (DSSP)




S

TT

SSSTT


TTTS
TTTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence LLIFIDNILVANEDIKEILNIYSSDIISLLSDNNNVYIEGLSVLNKTINSNEILTDYFSDLNNSYIRNFD
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Known secondary structure (DSSP) TT
SS






S


S

SS


TT
SSB


TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence EEILQYNRTYELFNYVFPEIAINKIEQNIYLSILNFKPLKFKLLNQYVQKWDEVIFSVLEKYLDISTTNN
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Known secondary structure (DSSP) SS


TT

BTTBTT

















BTT





SSS
 .........1060.........1070.........1080.........1090.........1100.........1110....
Sequence RIQLVDNKNNAQIFIINNDIFISNCLTLTYNNVNVYLSIKNQDYNWVICDLNHDIPKKSYLWIL
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Known secondary structure (DSSP)

S
TTT




TTSTT
SSSS


B


SSS


B




S
GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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