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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zkfA_

Fold library idPDB HeaderMoleculeTitle
c4zkfA_PDB header: hydrolaseChain: A: PDB Molecule: 2',5'-phosphodiesterase 12;PDBTitle: crystal structure of human phosphodiesterase


Added to library: Sat Jun 20 08:34:58 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIDPFTKYKVERNPPAFTELQLPRYIMAGFPVCPKLSLEFGDPASSLFRWYKEAKPGAAEPEVGVPSSLS
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Known secondary structure (DSSP)


TTGGG








S
TTS
B

SS
GGGSSSTT
S


SS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PSSPSSSWTETDVEERVYTPSNADIGLRLKLHCTPGDGQRFGHSRELESVCVVEAGPGTCTFDHRHLYTK
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Known secondary structure (DSSP)



GGG
S

SS
B


GGGTT


B
SS
B



SS



S

TGGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KVTEDALIRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDRAVF
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Known secondary structure (DSSP) S


TT


SSTTSTTS
ST
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKELLEKLVLYPSAQEK
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Known secondary structure (DSSP) TTT
SSSTTT


GGGTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDF
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Known secondary structure (DSSP) T


SS
TT




TT
TTSSS


 .........360.........370.........380.........390.........400.........410.........420
Sequence NSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDL
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Known secondary structure (DSSP)


TTSS
TT
GGGGTT
STT





S

TT


S
STT

T
 .........430.........440.........450.........460..
Sequence NALEVEQVIPLPSHEEVTTHQALPSVSHPSDHIALVCDLKWK
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Known secondary structure (DSSP) TT




TTTSSSSBTTBSSSB



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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