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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zkeA_

Fold library idPDB HeaderMoleculeTitle
c4zkeA_PDB header: gtp binding proteinChain: A: PDB Molecule: superkiller protein 7;PDBTitle: crystal structure of the s. cerevisiae ski7 gtpase-like domain, bound2 to gtp.


Added to library: Sat Jun 20 08:34:53 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SIDIHSFIATHPLNLTCLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDN
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Known secondary structure (DSSP)


TS


TTSSTT
S
S
TTT

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence TKTERENGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVIDCNYDSWEK
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Known secondary structure (DSSP) STS

S

STTS
TT


S

S
STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLDGPNNQIYEILKVISYLNKNSACKKHLIILLNKADLISWDKHRLEMIQSELNYVLKENFQWTDAEFQF
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Known secondary structure (DSSP) T

STT
TTSSTT
SS



GGGGTT
TT


GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence IPCSGLLGSNLNKDSINYVPEWYEGPTFFSQLYLLVEHNMNKIETTLEEPFVGTILQSSVLQPIAEINYV
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Known secondary structure (DSSP)
BTTTTBTT



SS


TT

S

SS



TTTS


SS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLKVLINSGYIQSGQTIEIHTQYEDFHYYGIVSRMKNSKQILETNTKNNISVGLNPDILEVLVKIHNTED
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Known secondary structure (DSSP) STT

SBSS



SS



SSB
STT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FTKKQFHIRKGDIIIHSRKTNTLKLLALRLIKLSIQTHALSDPVDLGSELLLYHNLTHNAVKLVKILGTN
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Known secondary structure (DSSP) TTT





TT







S



SS
TT
TTTTS
 .........430.........440.........450.........460.........470...
Sequence DISINPNQSLIVEVEIIEPDFALNVIDSKYITNNIVLTSIDHKVIAVGRIACQ
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Known secondary structure (DSSP)
S
TT

STTB
STT


TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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