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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zjnA_

Fold library idPDB HeaderMoleculeTitle
c4zjnA_PDB header: transport proteinChain: A: PDB Molecule: portal protein;PDBTitle: crystal structure of the bacteriophage g20c portal protein


Added to library: Sat May 30 08:12:05 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTVKNALNYIFGRIRSAKWYVEPASTDP
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Known secondary structure (DSSP)





SS





BTTBBTTB

GGGTSSTTSTS


SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EDIAIAAFIHAQLGIDDASVGKYPFGRLFAIYENAYIYGMAAGEIVLTLGADGKLILDKIVPIHPFNIDE
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Known secondary structure (DSSP) T

TTS

SS
TTS

GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLYDEEGGPKALKLSGEVKGGSQFVSGLEIPIWKTVVFLHNDDGSFTGQSALRAAVPHWLAKRALILLIN
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Known secondary structure (DSSP)
TTS

TTTS
GGGSS

SSS



TTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence HGLERFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRHGIILPDDWKFDTVDLKSAMPDAIPYLTY
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TT

TTS
TTS




TT




S




 .........290.........300.........310.........320.........330.........340.........350
Sequence HDAGIARALGIDFNTVQLNMGVQAINIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPSATRFPR
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Known secondary structure (DSSP) TTT

S
TTTTT
SS

S
TTTTSTT

S

 .........360.........370.........380.........390.........400.........410...
Sequence LTFEMEERNDFSAAANLMGMLINAVKDSEDIPTELKALIDALPSKMRRALGVVDEVREAVRQP
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Known secondary structure (DSSP)




S

TTT
SSS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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