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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zh7A_

Fold library idPDB HeaderMoleculeTitle
c4zh7A_PDB header: sugar binding proteinChain: A: PDB Molecule: outer membrane protein-adhesin;PDBTitle: structural basis of lewisb antigen binding by the helicobacter pylori2 adhesin baba


Added to library: Sat Aug 22 08:18:51 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDLSDRYESLNNLLNRYSTLNTLIKLSADPSAINAVRENLGASAKNLIGDKANSPAYQAVLLAINAAVGF
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Known secondary structure (DSSP)
T

STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence WNVVGYVTQCGGNANGQKSISSKTIFNNEPGYRSTSITCSLNGHSPGYYGPMSIENFKKLNEAYQILQTA
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Known secondary structure (DSSP) GGGB
B

BGGGB

SS
TT


SS

STTS
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence LKRGLPALKENNGKVNVTYTYTCSGDGNNNCSSQVTGVNNQKDGTKTKIQTIDGKSVTTTISSKVVDSRA
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Known secondary structure (DSSP)



TT



STT

TTS

S
TTTT
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGNTTGVSYTEITNKLEGVPDSAQALLAQASTLINTINNACPYFHAFSTTTGKICGAFSEEISAIQKMIT
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Known secondary structure (DSSP) TT

SSS

S





ST
 .........290.........300.........310.........320.........330.........340.........350
Sequence DAQELVNQTSVINEHEQTTPVGNNNGKPFNPFTDASFAQGMLANASAQAKMLNLAEQVGQAINPERLSGT
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Known secondary structure (DSSP) S


S

S
SSS



TTTS
TT
GGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence FQNFVKGFLATCNNPSQGSAPGTVTTQTFASGCAYVGQTITNLKNSIAHFGTQEQQIQQAENIADTLVNF
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Known secondary structure (DSSP) TTT


S





TT


TT
TTS

S
TT
 .........430.........440.........450.........460.........470.........480.....
Sequence KSRYSELGNTYNSITTALSNIPNAQSLQNAVSKKNNPYSPQGIDTNYYLNQNSYNQIQTINQELK
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Known secondary structure (DSSP) TSTT
GGGTTS
TT
TTS


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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