PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4zgwB_

Fold library id	PDB Header	Molecule	Title
c4zgwB_	1.47	PDB header: oxidoreductase	Chain: B: PDB Molecule: short-chain dehydrogenase/reductase;

Links to external resources
Added to library: Sat Apr 30 09:19:09 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H P L Q G K V A F V Q G G S R G I G A A I V K R L A S E G A A V A F T Y A S A V T T A G G K V L A I K A D S A D A A A L Q Q A V R Q A V S H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S
S S T T
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F G N L D I L V N N A G V F T L G G T E E L A L D D L D R M L A V N V R S V F V A S Q E A A R H M N D G G R I I H I G S T N A E R V P F G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
T T
G G G T
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A A V Y A M S K S A L V G L T K G M A R D L G P R S I T V N N V Q P G P V L M A I G R Y G K D E E I A G F V A Y L A G P Q A G Y I T G A S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
S S S S
S T T
T T
S

. . . . . . . .

Sequence S I D G G F S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	P	L	Q	G	K	V	A	F	V	Q	G	G	S	R	G	I	G	A	A	I	V	K	R	L	A	S	E	G	A	A	V	A	F	T	Y	A	S	A	V	T	T	A	G	G	K	V	L	A	I	K	A	D	S	A	D	A	A	A	L	Q	Q	A	V	R	Q	A	V	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T							S		S	S													T	T														T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	G	N	L	D	I	L	V	N	N	A	G	V	F	T	L	G	G	T	E	E	L	A	L	D	D	L	D	R	M	L	A	V	N	V	R	S	V	F	V	A	S	Q	E	A	A	R	H	M	N	D	G	G	R	I	I	H	I	G	S	T	N	A	E	R	V	P	F	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																T	T	T														T													T													G	G	G	T				S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	A	V	Y	A	M	S	K	S	A	L	V	G	L	T	K	G	M	A	R	D	L	G	P	R	S	I	T	V	N	N	V	Q	P	G	P	V	L	M	A	I	G	R	Y	G	K	D	E	E	I	A	G	F	V	A	Y	L	A	G	P	Q	A	G	Y	I	T	G	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							G	G	G	T														S	S	S	S																S	T	T		T	T			S
	.	.	.	.	.	.	.	.
Sequence	S	I	D	G	G	F	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T	T	T