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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zebA_

Fold library idPDB HeaderMoleculeTitle
c4zebA_PDB header: transport proteinChain: A: PDB Molecule: abc transporter, substrate binding protein (agrocinopines aPDBTitle: pbp acca from a. tumefaciens c58 in complex with agrocinopine a


Added to library: Sat Aug 22 09:11:58 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RRALRLGVNGLPNSLEPVNAISNVGPRIVNQIFDTLIARDFFAKGAPGNAIDLVPALAESWERIDEKSVR
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Known secondary structure (DSSP)


S


S

STTTTTTTTS


S
TTGGG
SS



SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FKLRQKVMFHDGVELTADDVAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPVVEDKYTVTLRTKTPSYLI
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Known secondary structure (DSSP)
SS
B
TTS
B

TS




SGGGTTTSTTS
STTSS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ETFVASWMSRIVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKITYQIVA
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Known secondary structure (DSSP) TSTT




S


SSSTTT
TT
SSS



S

 .........220.........230.........240.........250.........260.........270.........280
Sequence EPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTLIENFHMFTFNMNQEVFKDKKLRRALALAVN
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Known secondary structure (DSSP) STTS
S
GGGTSTT
S
TTSGGGSST

 .........290.........300.........310.........320.........330.........340.........350
Sequence RPIMVEALWKKQASIPAGFNFPNYGETFDPKRKAMEYNVEEAKRLVKESGYDGTPITYHTMGNYYANAMP
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Known secondary structure (DSSP) TT
SB

SSS

GGGGGG

TT






T

S


TTSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ALMMMIEMWKQIGVNVVMKTYAPGSFPPDNQTWMRNWSNGQWMTDAYATIVPEFGPNGQVQKRWGWKAPA
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Known secondary structure (DSSP) TTT



TT



GGG
S

SSSTSTTSTT




 .........430.........440.........450.........460.........470.........480.........490
Sequence EFNELCQKVTVLPNGKERFDAYNRMRDIFEEEAPAVILYQPYDVYAARKDVHWKPVSFEMMEFRNNLSFG
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Known secondary structure (DSSP)

SS
SB
TT



SSSS


TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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