PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4za6A_

Fold library id	PDB Header	Molecule	Title
c4za6A_	PDB header: signaling protein	Chain: A: PDB Molecule: tetr family transcriptional regulator;	PDBTitle: structure of the r. erythropolis transcriptional repressor qsdr from2 tetr family

Links to external resources
Added to library: Sat Oct 24 14:26:47 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P T D L E R R R A I D T A A S M Y L A E E P L D M S L L A E R L G V G R A T L Y R W V G N R D E L L G T V L A E A T E R T Y R K A M S Q A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G Q G P E Y I L D V F G R V M R S V E S S T E L R A L T K R E P M V F I K L A M M P G S I E S I S A S I T A E I L Q S Q V D A G Q L T I T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T
S S S T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . .

Sequence S P Q V L G E A L V R I C D V H L Y A P L L G R E K A E I E T A L D L I A L L L G V T R N H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G G T
S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	T	D	L	E	R	R	R	A	I	D	T	A	A	S	M	Y	L	A	E	E	P	L	D	M	S	L	L	A	E	R	L	G	V	G	R	A	T	L	Y	R	W	V	G	N	R	D	E	L	L	G	T	V	L	A	E	A	T	E	R	T	Y	R	K	A	M	S	Q	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T													T												S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	Q	G	P	E	Y	I	L	D	V	F	G	R	V	M	R	S	V	E	S	S	T	E	L	R	A	L	T	K	R	E	P	M	V	F	I	K	L	A	M	M	P	G	S	I	E	S	I	S	A	S	I	T	A	E	I	L	Q	S	Q	V	D	A	G	Q	L	T	I	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																		T																					S	S	S																				T	T					S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Sequence	S	P	Q	V	L	G	E	A	L	V	R	I	C	D	V	H	L	Y	A	P	L	L	G	R	E	K	A	E	I	E	T	A	L	D	L	I	A	L	L	L	G	V	T	R	N	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	G	G	G	G	T		S	S															T