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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4za5A_

Fold library idPDB HeaderMoleculeTitle
c4za5A_PDB header: lyaseChain: A: PDB Molecule: fdc1;PDBTitle: structure of a. niger fdc1 with the prenylated-flavin cofactor in the2 iminium and ketimine forms.


Added to library: Sat Jun 20 08:34:06 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QPAHLCFRSFVEALKVDNDLVEINTPIDPNLEAAAITRRVCETNDKAPLFNNLIGMKNGLFRILGAPGSL
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Known secondary structure (DSSP)

GGG
TT

S
B
TBTT

SSBTT
BTTB

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence RKSSADRYGRLARHLALPPTASMREILDKMLSASDMPPIPPTIVPTGPCKENSLDDSEFDLTELPVPLIH
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Known secondary structure (DSSP)
SSSTTTTTTTT

TT

GGGGS





S

GGGS
TTT

TTSS


B
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KSDGGKYIQTYGMHIVQSPDGTWTNWSIARAMVHDKNHLTGLVIPPQHIWQIHQMWKKEGRSDVPWALAF
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Known secondary structure (DSSP) TT
SS


BSS

TTSS



TT


TTS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVPPAAIMASSMPIPDGVTEAGYVGAMTGSSLELVKCDTNDLYVPATSEIVLEGTLSISETGPEGPFGEM
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Known secondary structure (DSSP) S

TS


TT

TS


SSSS
TT
S




T
 .........290.........300.........310.........320.........330.........340.........350
Sequence HGYIFPGDTHLGAKYKVNRITYRNNAIMPMSSCGRLTDETHTMIGSLAAAEIRKLCQQNDLPITDAFAPF
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Known secondary structure (DSSP) TS


TT


TT



SSSSSTTT



G
 .........360.........370.........380.........390.........400.........410.........420
Sequence ESQVTWVALRVDTEKLRAMKTTSEGFRKRVGDVVFNHKAGYTIHRLVLVGDDIDVYEGKDVLWAFSTRCR
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Known secondary structure (DSSP) GGTT




TSGGGTT


TT

TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence PGMDETLFEDVRGFPLIPYMGHGNGPAHRGGKVVSDALMPTEYTTGRNWEAADFNQSYPEDLKQKVLDNW
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Known secondary structure (DSSP) TTTT
SSB

TTSTSSS
TTB




GGGGTT





SSS
 .........
Sequence TKMGFSHHH
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Known secondary structure (DSSP) T



-


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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