PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4z9cA_

Fold library id	PDB Header	Molecule	Title
c4z9cA_	2.35	PDB header: transferase	Chain: A: PDB Molecule: pertussis toxin-like subunit arta;

Links to external resources
Added to library: Thu Feb 9 11:40:11 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T D F V Y R V D S R P P E E I F R D G F R S H G F N R N L Q Q H L R G D S C A A G S R D S A F I A T T T S L I E T Y N I A R Q Y Y S S S G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
B
T T
S S
B S S
T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H G R L Y R Y R I R A N N I F Y P I Q P S V N Y L T Q R G I T F S G F E R I M M R E Q N E I V A V E H I P G E N I V E A V E L T Y D R F N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T T
S
G G G T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q V S D G P G T T N A R Y V P G S T F V N P G V I P Q L V V P T V S V R E R I N A F G S L I S A C F A L K G V R R D G L N K R A T Y Y E P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T
S S
T T T G G G S G G G S
T T

. . . . . . . . . 220 . . .

Sequence F Y D A R G V L K E I I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	D	F	V	Y	R	V	D	S	R	P	P	E	E	I	F	R	D	G	F	R	S	H	G	F	N	R	N	L	Q	Q	H	L	R	G	D	S	C	A	A	G	S	R	D	S	A	F	I	A	T	T	T	S	L	I	E	T	Y	N	I	A	R	Q	Y	Y	S	S	S	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S													S			B								T	T						S	S			B	S						S														T	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	G	R	L	Y	R	Y	R	I	R	A	N	N	I	F	Y	P	I	Q	P	S	V	N	Y	L	T	Q	R	G	I	T	F	S	G	F	E	R	I	M	M	R	E	Q	N	E	I	V	A	V	E	H	I	P	G	E	N	I	V	E	A	V	E	L	T	Y	D	R	F	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S											T	T													T	T	T																					S				G	G	G											T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	V	S	D	G	P	G	T	T	N	A	R	Y	V	P	G	S	T	F	V	N	P	G	V	I	P	Q	L	V	V	P	T	V	S	V	R	E	R	I	N	A	F	G	S	L	I	S	A	C	F	A	L	K	G	V	R	R	D	G	L	N	K	R	A	T	Y	Y	E	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T											S			T	T					S	S										T	T	T			G	G	G	S	G	G	G	S							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	F	Y	D	A	R	G	V	L	K	E	I	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)