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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4z92C_

Fold library idPDB HeaderMoleculeTitle
c4z92C_PDB header: virusChain: C: PDB Molecule: capsid subunit vp0;PDBTitle: crystal structure of parechovirus-1 virion


Added to library: Sat Nov 21 08:19:48 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VGNEIGGNLLTKVADDASNILGPNCFATTAEPENKNVVQATTTVNTTNLTQHPSAPTMPFSPDFSNVDNF
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Known secondary structure (DSSP)

SSTTTTTTS
BTTB
S







SS
S

TTSS






SS

TT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HSMAYDITTGDKNPSKLVRLETHEWTPSWARGYQITHVELPKVFWDHQDKPAYGQSRYFAAVRCGFHFQV
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Known secondary structure (DSSP)
SS
S
TTGGGS

SS

TT


BTTGGGGSSTTSTTTTBS

 .........150.........160.........170.........180.........190.........200.........210
Sequence QVNVNQGTAGSALVVYEPKPVVTYDSKLEFGAFTNLPHVLMNLAETTQADLCIPYVADTNYVKTDSSDLG
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Known secondary structure (DSSP)


SS

T
TTS
TT
GGGSSTTT
S



SSSSTT
S
S
 .........220.........230.........240.........250.......
Sequence QLKVYVWTPLSIPTGSANQVDVTILGSLLQLDFQNPRVFAQDVNIYD
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Known secondary structure (DSSP)

SSS




B

B
STT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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