PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4z48B_

Fold library id	PDB Header	Molecule	Title
c4z48B_	PDB header: structural biology, unknown function	Chain: B: PDB Molecule: uncharacterized protein;	PDBTitle: crystal structure of a duf1329 family protein (despig_00262) from2 desulfovibrio piger atcc 29098 at 1.75 a resolution

Links to external resources
Added to library: Sat Apr 25 08:17:36 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T D P V K A G Y D L A V R X D Q V D T S Q D S Y S E A V X S I N R G G K V L T R S F K T Y S K H F G K D G K D E Y S L I V F D R P A D V N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S T T S T T S
S T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T K Y L V W S Y R G L E Q D D D X W V Y L P A E S L V R R I S G S S K F A S F X R S D L S N E D I Q N L D D V D E Y D Y L L Q G E E N V D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S
T T T T
G G G G G S B S T T S S S B G G G G S
S
G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I D C Y I L E R T P K K G K E T Q Y S R Q V Q W V R K D T L L R L R A D Y Y D K K D R L V K K L F F S R Q E K I D G I W T V T Q X R V E R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T T
T T S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence R E G S F T V I D W S N L R Y D V G L S D A Y F E H S A L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
G G G G S G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	D	P	V	K	A	G	Y	D	L	A	V	R	X	D	Q	V	D	T	S	Q	D	S	Y	S	E	A	V	X	S	I	N	R	G	G	K	V	L	T	R	S	F	K	T	Y	S	K	H	F	G	K	D	G	K	D	E	Y	S	L	I	V	F	D	R	P	A	D	V	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S				S													T	T															S	T	T	S												S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	K	Y	L	V	W	S	Y	R	G	L	E	Q	D	D	D	X	W	V	Y	L	P	A	E	S	L	V	R	R	I	S	G	S	S	K	F	A	S	F	X	R	S	D	L	S	N	E	D	I	Q	N	L	D	D	V	D	E	Y	D	Y	L	L	Q	G	E	E	N	V	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S	S	S									T	T	T	T							G	G	G	G	G	S	B	S	T	T	S	S	S	B	G	G	G	G	S		S			G	G	G												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	D	C	Y	I	L	E	R	T	P	K	K	G	K	E	T	Q	Y	S	R	Q	V	Q	W	V	R	K	D	T	L	L	R	L	R	A	D	Y	Y	D	K	K	D	R	L	V	K	K	L	F	F	S	R	Q	E	K	I	D	G	I	W	T	V	T	Q	X	R	V	E	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T				S										T	T	T											T	T	S															T	T												T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	R	E	G	S	F	T	V	I	D	W	S	N	L	R	Y	D	V	G	L	S	D	A	Y	F	E	H	S	A	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																		G	G	G	G	S	G	G	G	T