PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4yxxA_

Fold library id	PDB Header	Molecule	Title
c4yxxA_	PDB header: de novo protein	Chain: A: PDB Molecule: dtor_6x35l;	PDBTitle: computationally designed left-handed alpha/alpha toroid with 6 repeats

Links to external resources
Added to library: Sat Dec 19 08:20:30 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V S L E Q A L K I L K V A A E L G T T V E E A V K R A L K L K T K L G V S L E Q A L K I L E V A A E L G T T V E E A V K R A L K L K T K L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T
T S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V S L E Q A L K I L E V A A K L G T T V E E A V K R A L K L K T K L G V S L E Q A L K I L K V A A E L G T T V E E A V K R A L K L K T K L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T
T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence V S L E Q A L K I L E V A A E L G T T V E E A V K R A L K L K T K L G V S L E Q A L K I L E V A A K L G T T V E E A V K R A L K L K T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	S	L	E	Q	A	L	K	I	L	K	V	A	A	E	L	G	T	T	V	E	E	A	V	K	R	A	L	K	L	K	T	K	L	G	V	S	L	E	Q	A	L	K	I	L	E	V	A	A	E	L	G	T	T	V	E	E	A	V	K	R	A	L	K	L	K	T	K	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S																	T																	T	S																	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	S	L	E	Q	A	L	K	I	L	E	V	A	A	K	L	G	T	T	V	E	E	A	V	K	R	A	L	K	L	K	T	K	L	G	V	S	L	E	Q	A	L	K	I	L	K	V	A	A	E	L	G	T	T	V	E	E	A	V	K	R	A	L	K	L	K	T	K	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S																	T																	T																		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	V	S	L	E	Q	A	L	K	I	L	E	V	A	A	E	L	G	T	T	V	E	E	A	V	K	R	A	L	K	L	K	T	K	L	G	V	S	L	E	Q	A	L	K	I	L	E	V	A	A	K	L	G	T	T	V	E	E	A	V	K	R	A	L	K	L	K	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S																																		T	S													T	T