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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ysnD_

Fold library idPDB HeaderMoleculeTitle
c4ysnD_1.94PDB header: isomeraseChain: D: PDB Molecule: putative 4-aminobutyrate aminotransferase;


Added to library: Sat Apr 23 08:38:16 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELMGKLDKASKLIDEENKYYARSARINYYNLVIDHAHGATLVDVDGNKYIDLLASASAINVGHTHEKVVK
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Known secondary structure (DSSP)
TTGGGTTTS
GGG







BTTTS
SST
TT
BT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AIADQAQKLIHYTPAYFHHVPGMELSEKLAKIAPGNSPKMVSFGNSGSDANDAIIKFARAYTGRQYIVSY
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Known secondary structure (DSSP)
S


TTTS

SSSSS
SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence MGSYHGSTYGSQTLSGSSLNMTRKIGPMLPSVVHVPYPDSYRTYPGETEHDVSLRYFNEFKKPFESFLPA
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Known secondary structure (DSSP) TT



SS

S
GGGTTTT
S

SS



SSS

TT

TTT

G
 .........220.........230.........240.........250.........260.........270.........280
Sequence DETACVLIEPIQGDGGIIKAPEEYMQLVYKFCHEHGILFAIDEVNQGLGRTGKMWAIQQFKDIEPDLMSV
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Known secondary structure (DSSP) GG
STTTTS

T

TTTTTTTTSSSSGGGGSSS


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence GKSLASGMPLSAVIGKKEVMQSLDAPAHLFTTAGNPVCSAASLATLDVIEYEGLVEKSATDGAYAKQRFL
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Known secondary structure (DSSP)
GGGGTTSS
TT

TTSS

TTTT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence EMQQRHPMIGDVRMWGLNGGIELVKDPKTKEPDSDAATKVIYYAFAHGVVIITLAGNILRFQPPLVIPRE
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Known secondary structure (DSSP)
TTSSS
BS
TTT

B
TT
TTT


TT

 .........430.........440..
Sequence QLDQALQVLDDAFTAVENGEVT
Predicted secondary structure




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Known secondary structure (DSSP) TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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