PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4yqyA_

Fold library id	PDB Header	Molecule	Title
c4yqyA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: putative dehydrogenase;	PDBTitle: crystal structure of a putative dehydrogenase from sulfitobacter sp.2 (cog1028) (target efi-513936) in its apo form

Links to external resources
Added to library: Sat Mar 28 08:51:03 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L G T E N L Y F Q S X D L K G K T A I V T G G R G D I G R A C V L E L A A R G A N V A I N Y X A S S E G A D S A V A E I K A A G G N A F A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S T T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q G D X T K E A D V A A L V E K T V K E F G Q V D T L V H V T G G L I A R V T X S E X T L D H W Q S V X D V N L T S F V L X V R E C L P H X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
G G G
T G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T E G S S I V G L A S Q A G R D G G G P G A S A Y G A S K G A L X T L T R G L A K E L G P K I R V N S L C P G X I D T D F H N R T H V A N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T T
S B
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence S P V K R E G T S E D V A K L A V F L A S D D A A F I T G A N V D I N G G X L F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S
B
S G G G T T
S
S T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	G	T	E	N	L	Y	F	Q	S	X	D	L	K	G	K	T	A	I	V	T	G	G	R	G	D	I	G	R	A	C	V	L	E	L	A	A	R	G	A	N	V	A	I	N	Y	X	A	S	S	E	G	A	D	S	A	V	A	E	I	K	A	A	G	G	N	A	F	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	T								T	T	S													T	T								S	S															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	G	D	X	T	K	E	A	D	V	A	A	L	V	E	K	T	V	K	E	F	G	Q	V	D	T	L	V	H	V	T	G	G	L	I	A	R	V	T	X	S	E	X	T	L	D	H	W	Q	S	V	X	D	V	N	L	T	S	F	V	L	X	V	R	E	C	L	P	H	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S																S																		G	G	G														T											G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	E	G	S	S	I	V	G	L	A	S	Q	A	G	R	D	G	G	G	P	G	A	S	A	Y	G	A	S	K	G	A	L	X	T	L	T	R	G	L	A	K	E	L	G	P	K	I	R	V	N	S	L	C	P	G	X	I	D	T	D	F	H	N	R	T	H	V	A	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	T	T																							T	T	T										S	B			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	S	P	V	K	R	E	G	T	S	E	D	V	A	K	L	A	V	F	L	A	S	D	D	A	A	F	I	T	G	A	N	V	D	I	N	G	G	X	L	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T		S		B														S	G	G	G	T	T			S						S	T	T	S