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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4yptA_

Fold library idPDB HeaderMoleculeTitle
c4yptA_PDB header: hydrolaseChain: A: PDB Molecule: replicase polyprotein 1ab;PDBTitle: x-ray structural of three tandemly linked domains of nsp3 from murine2 hepatitis virus at 2.60 angstroms resolution


Added to library: Sat Aug 29 08:20:50 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IQLDDDARVFVQANMDCLPTDWRLVNKFDSVDGVRTIKYFECPGGIFVSSQGKKFGYVQNGSFKEASVSQ
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Known secondary structure (DSSP)



TTSS

TT

TTTTTTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence IRALLANKVDVLCTVDGVNFRSCCVAEGEVFGKTLGSVFCDGINVTKVRCSAIYKGKVFFQYSDLSEADL
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Known secondary structure (DSSP) S
SSSSS
TTSB
STT
TT
B

GGGTT

SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence VAVKDAFGFDEPQLLKYYTMLGMCKWPVVVCGNYFAFKQSNNNYINVACLMLQHLSLKFPKWQWQEAWNE
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Known secondary structure (DSSP) T






TT


TT

TT




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FRSGKPLRFVSLVLAKGSFKFNEPSDSIDFMRVVLREADLSGATCNLEFVCKCGVKQEQRKGVDAVMHFG
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Known secondary structure (DSSP) TT

S


TT



S

TT
TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLDKGDLVRGYNIACTCGSKLVHCTQFNVPFLICSNTPEGRKLPDDVVAANIFTGGSVGHYTHVKCKPKY
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Known secondary structure (DSSP)
S

TT
S





TT
S
TTTT
SSS
 .........360.........370.......
Sequence QLYDACNVNKVSEAKGNFTDCLYLKNL
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Known secondary structure (DSSP) TT
S





S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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