Fold library entry viewer: c4ypjB_

Added to library: Sat May 2 08:28:50 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	S	Y	D	G	E	R	R	V	N	F	N	E	N	W	R	F	Q	R	E	T	N	G	S	I	A	G	A	Q	N	P	G	F	D	D	S	S	W	R	K	L	N	L	P	H	D	W	S	I	E	L	D	F	N	K	N	S	L	A	T	H	E	G	G	Y	L	D	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S		S						S	S							S	S	S			T	T	T	T	S	T	T				T	T	S					S	S			S	G	G	G	S				T	T		T	T	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	G	W	Y	R	K	T	F	T	I	P	E	S	M	K	G	K	R	I	S	L	D	F	D	G	V	Y	M	N	S	T	T	Y	L	N	G	E	V	L	G	T	Y	P	F	G	Y	N	A	F	S	Y	D	I	S	D	K	L	Y	K	D	G	R	A	N	V	L	V	V	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												G	G	G	T	T								S			B	S							T	T									S	S	S							T	T	T	S			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	N	T	Q	P	S	S	R	W	Y	S	G	S	G	I	Y	R	N	V	Y	L	T	V	T	D	P	I	H	V	A	R	Y	G	T	F	V	T	T	P	N	L	E	K	S	I	K	E	D	R	A	D	V	N	I	K	T	K	I	S	N	D	A	A	E	A	K	Q	V	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				S	S					B			S									S													T	T					G	G	G	T														S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	S	T	I	Y	D	G	A	G	N	T	V	Q	T	V	E	T	E	E	K	T	A	A	A	G	T	V	T	P	F	E	Q	N	T	V	I	K	Q	P	K	L	W	S	I	D	K	P	Y	R	Y	N	L	V	T	E	V	I	V	G	G	Q	T	V	D	T	Y	E	T	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S															T	T													S				B		S	S	S	B												T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	V	R	Y	F	K	F	D	E	N	E	G	F	S	L	N	G	E	Y	M	K	L	H	G	V	S	M	H	H	D	L	G	A	L	G	A	A	T	N	A	R	G	V	E	R	Q	M	Q	I	M	K	D	M	G	V	N	A	I	R	V	T	H	N	P	A	S	P	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T					T	T												S			G	G	G	T	T																		T							T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	A	A	N	K	L	G	L	F	I	I	E	E	A	F	D	S	W	A	Q	S	K	K	P	Y	D	Y	G	R	F	F	N	A	W	A	E	H	D	I	K	E	M	V	D	R	G	K	N	E	P	A	I	I	M	W	S	I	G	N	E	I	Y	D	T	T	N	A	A	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T									S		S	S	S		S	S	T	T	S	T																				T	T		T	T									S		G	G	G	G	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	T	A	R	N	L	V	G	W	V	K	E	I	D	T	T	R	P	T	T	I	G	E	D	K	T	R	G	D	K	V	N	V	T	P	I	N	S	Y	I	K	E	I	F	N	I	V	D	V	V	G	L	N	Y	S	E	N	N	Y	D	G	Y	H	K	Q	N	P	S	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			S	S								T	T		T	T	S	S	S															S	S						S		G	G	G	T	T							T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	Y	G	S	E	T	S	S	A	T	R	S	R	G	V	Y	T	H	P	Y	Q	Y	N	Q	S	T	K	Y	A	D	L	Q	Q	S	S	Y	D	N	D	Y	V	G	W	G	R	T	A	E	D	A	W	K	Y	D	R	D	L	K	H	I	A	G	Q	F	I	W	T	G	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B				T	T				S	T	T					S				T	T	S				S	S	S					T	T													T		T	T							S		S	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	I	G	E	P	T	P	Y	Y	N	S	Y	P	A	K	S	S	Y	F	G	A	V	D	T	A	G	F	P	K	D	I	F	Y	Y	Y	Q	S	Q	W	K	K	E	P	M	V	H	L	L	P	H	W	N	W	K	E	G	E	K	V	R	V	L	A	Y	T	N	A	S	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S			T	T		T	T		T	T			B		S			S	B		T	T	S		B														S							S		S				T	T										S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	L	V	L	N	G	E	S	L	G	E	K	N	Y	D	N	K	Q	T	S	W	G	A	P	Y	K	E	T	K	D	G	K	T	Y	L	E	W	A	V	P	F	K	P	G	K	L	E	A	V	A	K	D	E	N	G	K	V	I	A	R	D	Q	V	V	T	A	G	E	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T														T	T	S							T	T	S		S	S									S	S									T	T	S													S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	V	R	L	T	A	D	R	K	V	V	K	A	D	G	T	D	L	S	F	I	T	A	D	I	V	D	S	K	G	I	V	V	P	D	A	D	H	L	I	T	F	N	V	T	G	Q	G	E	L	A	G	V	D	N	G	N	A	S	S	V	E	R	Y	K	D	N	K	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S					S	S	S												T	T	S		B		T	T												S											T	T					S	S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810
Sequence	A	F	S	G	K	A	L	A	I	V	Q	S	S	K	L	S	G	K	I	T	V	H	A	S	V	A	G	L	S	S	D	S	T	S	V	F	T	V	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T	T										S	S											T	T	S	B

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PDB structure

FASTA sequence

Hidden Markov model

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