PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4yioB_

Fold library id	PDB Header	Molecule	Title
c4yioB_	1.60	PDB header: oxidoreductase	Chain: B: PDB Molecule: superoxide dismutase;

Links to external resources
Added to library: Sat Jan 16 08:29:11 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A I I L P D L P Y A Y D A L E P Y I D A E T M T L H H D K H H A T Y V A N A N A A L E K H P E I G E D L E A L L A D V E K I P A D I R Q A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T T T T S
T
G G G
S
S G G G S
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I N N G G G H L N H A L F W E L L S P E K Q E P T A E V A A A I N E A F G S F E A F Q E V F T T S A T T R F G S G W A W L V V N A E G K L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B
S S
S S
S S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 .

Sequence V V S T P N Q D T P I S D G K K P I L A L D V W E H A Y Y L K Y R N V R P N Y I K A F F E I I N W N K V A E L Y A E A L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G T
S G G G T T T
S B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	I	I	L	P	D	L	P	Y	A	Y	D	A	L	E	P	Y	I	D	A	E	T	M	T	L	H	H	D	K	H	H	A	T	Y	V	A	N	A	N	A	A	L	E	K	H	P	E	I	G	E	D	L	E	A	L	L	A	D	V	E	K	I	P	A	D	I	R	Q	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		T	T	T	T	T	T	T	S											T																	G	G	G		S								S	G	G	G	S		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	N	N	G	G	G	H	L	N	H	A	L	F	W	E	L	L	S	P	E	K	Q	E	P	T	A	E	V	A	A	A	I	N	E	A	F	G	S	F	E	A	F	Q	E	V	F	T	T	S	A	T	T	R	F	G	S	G	W	A	W	L	V	V	N	A	E	G	K	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	B		S	S																	S	S																	S	S									T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Sequence	V	V	S	T	P	N	Q	D	T	P	I	S	D	G	K	K	P	I	L	A	L	D	V	W	E	H	A	Y	Y	L	K	Y	R	N	V	R	P	N	Y	I	K	A	F	F	E	I	I	N	W	N	K	V	A	E	L	Y	A	E	A	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			G	G	G	G	T										S	G	G	G	T					T	T												S	B