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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4yicA_

Fold library idPDB HeaderMoleculeTitle
c4yicA_PDB header: transport proteinChain: A: PDB Molecule: trap transporter solute binding protein;PDBTitle: crystal structure of a trap transporter solute binding protein2 (ipr025997) from bordetella bronchiseptica rb50 (bb0280, target efi-3 500035) with bound picolinic acid


Added to library: Sat Apr 4 08:19:24 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ANPTVRWRMSTSWPKSLDTIYGSADELCKRVGQLTDGKFEIRAFPGGELVPSAQNMDAVSNGTVECNHVL
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Known secondary structure (DSSP)



SS
TT
TTTTTS
TTTSS
GGGTTSSSB
 .........80.........90.........100.........110.........120.........130.........140
Sequence STMYIGKNTALTFDTGLSFGLNARQHNAWIHYGGGLQQLRELYKKYNIVNHVCGNVGVQMGGWYRKEIKS
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Known secondary structure (DSSP) GGGGTTT
GGG

TT


SSTTT

SB

SS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TADLNGLNMRIGGIGGMVLSKLGVVPQQIPPGDIYPALEKGTIDAAEWIGPYDDEKLGFNKVAPYYYSPG
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Known secondary structure (DSSP) GGGGTT


STGGGT



GGGTSSS

S
TGGGT


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence WFEGSASITSMVNDKAWEALPPAYQAAFEAACGEQSMRMLANYDARNPLALRKLIAGGAKVSFFPKEVMD
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Known secondary structure (DSSP) TT
SS
TS
TT


 .........290.........300.........310.........320.........330.........340....
Sequence AVYKASQQLWTELSEKNPDFKAIYPGWKKFQEDEAGWFRVAENALDNYTFAAVARAQAKAENLY
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Known secondary structure (DSSP)
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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