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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4yhcA_

Fold library idPDB HeaderMoleculeTitle
c4yhcA_PDB header: structural proteinChain: A: PDB Molecule: sterol regulatory element-binding protein cleavage-PDBTitle: crystal structure of the wd40 domain of scap from fission yeast


Added to library: Sat Apr 4 08:41:33 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GWSDHDELSTDTTLHEEKFRIEPVPVHHQLDILKIAVSENYKTFASVGLDRSLVVWDLRQWCTKLVLSKE
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Known secondary structure (DSSP)

SS




S
S


SS

TTS
TT

TTTT
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence QMPRTLKAIALDPQGNYVSLFSKDTLFILNVESPSLMLQHSYHSKPNSKLNVFWMPGTHKDDEWKNFELV
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Known secondary structure (DSSP) GS
S



TTSS
SSTTTT



SS


S

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VVESSGEIQVFSLTIEIEGADIALVEKFQLSSPIIKSISIVSPTANRIASLTESGEVTVYSKKGPVWSPK
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Known secondary structure (DSSP) TTS
SS

SS

SS
TTS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILSQNKNYLTETKKDIYGIAMADILFLARDSGVDMIDLKNDELLHSFTLPPIKVNTFSVGVSNSRFVNGQ
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Known secondary structure (DSSP)



GGGTTS


GGGT
SSTTTT


B
TT

S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FRVSSISFCFTHAVTEKVLYYYYGNESNESYIILNKWDQQPNLVDVHDPDNSLASLTFDELQENIHEVED
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Known secondary structure (DSSP) SBTTT


S
TTTSSSS







TTTTS
GGG


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASESVMSSDGLYIFGMRRKSSSGISGETQVWEVWMYSQSEKKHRSKSLKMYNSLIIADPGPSLAVSDRCV
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Known secondary structure (DSSP) T

TTSS


TTTT


S



TT
 .........430.........
Sequence AIVLGNYVALVGYGSEIFR
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Known secondary structure (DSSP) TTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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