PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4ygsA_

Fold library id	PDB Header	Molecule	Title
c4ygsA_	PDB header: hydrolase	Chain: A: PDB Molecule: hydrolase;	PDBTitle: crystal structure of had phosphatase from thermococcus onnurineus

Links to external resources
Added to library: Sat Apr 25 09:05:02 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K A V L F D I D G T I L T E E P L I M L F L P Q V Y D K L S R K L G I S K D E A R E R F L S E I L G R R D S Y D W H D W N F F F K L F D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T T
T
T T T S G G G G
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D L K Y E E L L E R Y P H K L Q V Y P D T I P T L E W L R D T G Y K L G I V T S G P K Y Q R L K L K L T G L L D Y F D V V I T R D D V N A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G S
T T T
S S
T T T
G G G
S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K P E P K I F L Y T I E R L G V E P G E A V M V G D S L S Q D V Y G A K S V G M T A V W I N R N G D R G Y N M A D Y E I R T L Y E L R K I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T
G G G S
T T T T T T
S S
T T
S S S S G G G

. . . . .

Sequence G G E R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	A	V	L	F	D	I	D	G	T	I	L	T	E	E	P	L	I	M	L	F	L	P	Q	V	Y	D	K	L	S	R	K	L	G	I	S	K	D	E	A	R	E	R	F	L	S	E	I	L	G	R	R	D	S	Y	D	W	H	D	W	N	F	F	F	K	L	F	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B	T	T	T																							T																	T	T	T	S	G	G	G	G									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	L	K	Y	E	E	L	L	E	R	Y	P	H	K	L	Q	V	Y	P	D	T	I	P	T	L	E	W	L	R	D	T	G	Y	K	L	G	I	V	T	S	G	P	K	Y	Q	R	L	K	L	K	L	T	G	L	L	D	Y	F	D	V	V	I	T	R	D	D	V	N	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											G	G	G	S				T	T												T								S	S		T									T	T		G	G	G		S									T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	P	E	P	K	I	F	L	Y	T	I	E	R	L	G	V	E	P	G	E	A	V	M	V	G	D	S	L	S	Q	D	V	Y	G	A	K	S	V	G	M	T	A	V	W	I	N	R	N	G	D	R	G	Y	N	M	A	D	Y	E	I	R	T	L	Y	E	L	R	K	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S												T			G	G	G						S		T	T	T	T							T	T								S	S					T	T		S	S				S	S	G	G	G
	.	.	.	.	.
Sequence	G	G	E	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S