PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4yfvA_

Fold library id	PDB Header	Molecule	Title
c4yfvA_	PDB header: transferase	Chain: A: PDB Molecule: viof;	PDBTitle: x-ray structure of the 4-n-formyltransferase viof from providencia2 alcalifaciens o30

Links to external resources
Added to library: Sat Mar 14 08:20:14 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K K I L V I S D N Y Q L V S Y I K N L Y L S N E E W S K E L F I D Y S Y S S I N R N P Q S L I E L G M T E I D I K N K N L N E L N D Y H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S
S
T T T
G G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I I S A H C K Q I F P A H I V N N K L C I N I H P G L N P Y N R G W F P Q V F S I L N K K P I G A T I H K M D S E V D H G E I Y C Q E E V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S
S S
T T T T S
S S T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I L S H E T S I D I Y N K V I E L E K K L I K N N L L K I I N N E L Q P K L P S Q E G N Y N S I Q D F N K L C K L N L E D N G S L R E H I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S
B
S S
B
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . .

Sequence L L R A L T H G D F K N A Y F Y D E N N T K V F V K I E L S L S Q E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	K	I	L	V	I	S	D	N	Y	Q	L	V	S	Y	I	K	N	L	Y	L	S	N	E	E	W	S	K	E	L	F	I	D	Y	S	Y	S	S	I	N	R	N	P	Q	S	L	I	E	L	G	M	T	E	I	D	I	K	N	K	N	L	N	E	L	N	D	Y	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																														T	T		S									S						T	T	T			G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	I	S	A	H	C	K	Q	I	F	P	A	H	I	V	N	N	K	L	C	I	N	I	H	P	G	L	N	P	Y	N	R	G	W	F	P	Q	V	F	S	I	L	N	K	K	P	I	G	A	T	I	H	K	M	D	S	E	V	D	H	G	E	I	Y	C	Q	E	E	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S	S										S							S	S		T	T	T	T			S																						S	S	T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	L	S	H	E	T	S	I	D	I	Y	N	K	V	I	E	L	E	K	K	L	I	K	N	N	L	L	K	I	I	N	N	E	L	Q	P	K	L	P	S	Q	E	G	N	Y	N	S	I	Q	D	F	N	K	L	C	K	L	N	L	E	D	N	G	S	L	R	E	H	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																											T	T		S			B			S	S															B			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Sequence	L	L	R	A	L	T	H	G	D	F	K	N	A	Y	F	Y	D	E	N	N	T	K	V	F	V	K	I	E	L	S	L	S	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T			S	S	S								T	T												S	S