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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ydeB_

Fold library idPDB HeaderMoleculeTitle
c4ydeB_2.70PDB header: transferaseChain: B: PDB Molecule: protein farnesyltransferase/geranylgeranyltransferase type-


Added to library: Sat Jul 9 08:28:13 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSPIIDITKYFSPTVESQMDLELIILNEYYLKTHQHHNYFYIDAHLKYILSSLIDPMPSGYQVLDVNHSW
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Known secondary structure (DSSP)

SS

SS



T






S


GGGGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MIYWLLNSYYLIQNPTMEINQSILDLIVNKITKCINYGDSLSGVPFDGIGGGNNQLGHLASTYAAILTLI
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Known secondary structure (DSSP) BSS
SS


TB



SSTT




B
SSTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence LTDQYELLDNLRELIRDWLLTLKKRSSCGSGASFIMHENGEMDARSTYCALIIINLLNLTNLDPLIDGVE
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Known secondary structure (DSSP) TT

SSSSS
SSTT


STTTT


TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NWLNSCQTYEGGFSNIPNTEAHGGYTYCALASYFLLYDNRKQFSVCWEKLLEWSVHRQHELEGGVDGRTN
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Known secondary structure (DSSP) TB
TTSSB
SSTTS



SSGGG



TTB
TTT

BBSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KLVDACYGFWIGGLSPLLQLIIMNSQQQEVKVFDEEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSL
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Known secondary structure (DSSP)

B
TTTTTT







S
TTB
TTSSB
SSTTS


 .........360.........370.........380.........390.........400.........410.
Sequence SGLSILEHSYKFSQDDEGRSLAFQIDVENFTNPIHPVFGIPIKFVKKCHDYFKLKPISKPK
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Known secondary structure (DSSP)


SS

SS
GGGG


B

B
TTTSSBTTSTT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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