PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4ybgA_

Fold library id	PDB Header	Molecule	Title
c4ybgA_	PDB header: hydrolase	Chain: A: PDB Molecule: protein maelstrom;	PDBTitle: crystal structure of the mael domain of drosophila melanogaster2 maelstrom

Links to external resources
Added to library: Sat May 2 08:13:10 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L M D M K R T I E R L V L N A K M S H D L E N A K F V F V A F N Y F T K A L T T D V Y V P A E F A A C E Y S L K E G I R S I Y S T M I D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G
S S S S
T T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G Q D A L L H S S T T H D L P L P P N A L G E K N M T K L Y R N I V D Y L S K C Q G K G K T L V V F T P A E N I T M V K S C F R Y L E D D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
S B
S S S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R D G K I Q V F D I Q Y L L F I L K K E V M N V A D L N D E K I N K F A T D A F F K K D F F E F T A G I A C Q Y H E D N D R T K Y C T Q S M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T T T
T T
S
T
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . .

Sequence V T R W A Y T F T D F M C G D L A I T V Q P G K H I P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T
B T T T B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	M	D	M	K	R	T	I	E	R	L	V	L	N	A	K	M	S	H	D	L	E	N	A	K	F	V	F	V	A	F	N	Y	F	T	K	A	L	T	T	D	V	Y	V	P	A	E	F	A	A	C	E	Y	S	L	K	E	G	I	R	S	I	Y	S	T	M	I	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T		G	G	G															S	S	S	S														T	T	T										B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	Q	D	A	L	L	H	S	S	T	T	H	D	L	P	L	P	P	N	A	L	G	E	K	N	M	T	K	L	Y	R	N	I	V	D	Y	L	S	K	C	Q	G	K	G	K	T	L	V	V	F	T	P	A	E	N	I	T	M	V	K	S	C	F	R	Y	L	E	D	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T					T	T	S			S	B																				S	S	S								G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	D	G	K	I	Q	V	F	D	I	Q	Y	L	L	F	I	L	K	K	E	V	M	N	V	A	D	L	N	D	E	K	I	N	K	F	A	T	D	A	F	F	K	K	D	F	F	E	F	T	A	G	I	A	C	Q	Y	H	E	D	N	D	R	T	K	Y	C	T	Q	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T				T	T														T	T	T	T		T	T		S								T		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Sequence	V	T	R	W	A	Y	T	F	T	D	F	M	C	G	D	L	A	I	T	V	Q	P	G	K	H	I	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G	T	T					B	T	T	T	B