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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4y9lB_

Fold library idPDB HeaderMoleculeTitle
c4y9lB_PDB header: oxidoreductaseChain: B: PDB Molecule: protein acdh-11, isoform b;PDBTitle: crystal structure of caenorhabditis elegans acdh-11


Added to library: Sat Jun 6 08:34:55 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TITARHTQYSHAKTGGFSQTGPTLHNPYKDDPILDRTLRRLLPESEYMRVAADLSKFGDRITSEVEHLGR
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Known secondary structure (DSSP)




GGG






S









TTTS
SSS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence QAELEQPRLEHQDAWGKRVDKLIVCNEWHKLKQICAEEGVISIGYEDSVDPFVRRIHQVAKLFLFSPSAG
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Known secondary structure (DSSP) S


TTS


TTTTGGGG
TTS
GGGST
 .........150.........160.........170.........180.........190.........200.........210
Sequence LVSCPMAMTDGAVKTLTSLNLYGKHKLATEAVDRLRSRDPSKAWTSGQWMTEKKGGSDVAGGCDTYAVQI
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Known secondary structure (DSSP) TTTT
TTTST


TTT





SS
SS



 .........220.........230.........240.........250.........260.........270.........280
Sequence DKDTYRLHGYKWFSSAVDADVALTLARIVDSDGNALEGSRGLSLFLLKIRDESGNLNGIQMVRLKNKLGT
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Known secondary structure (DSSP) TT
TTSS

TTS



SGGGSB
TTS
BSS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KQLPTAELLLDGAIAERIGDQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSK
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Known secondary structure (DSSP) TTS
S
TT
TTTT
TTGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence WPLHTTTLAKMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIEC
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Known secondary structure (DSSP)
T


T
 .........430.........440.........450.........460.........470.........480.........490
Sequence FGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLAFGKRVEQLLGNTKTEDEKLKK
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Known secondary structure (DSSP) TGGGGG
GGGSTTTTTTTS

S
TT

TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SKEAVESALKQLQKLLVKASDSAIQGETRIDSVARHIAFTIARIYSGALLIDHASDSSVANQSDIEVAYR
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Known secondary structure (DSSP) GGGS
B
GGGG
TTT

 .........570.........580.........590...
Sequence YCCEQPLIDLRWEWFASERVKADREIVFDNFTA
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Known secondary structure (DSSP) SS
S



GGGGBSTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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