PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4y8fA_

Fold library id	PDB Header	Molecule	Title
c4y8fA_	PDB header: isomerase	Chain: A: PDB Molecule: triosephosphate isomerase;	PDBTitle: crystal structure of triosephosphate isomerase from clostridium2 perfringens

Links to external resources
Added to library: Sat Jul 18 08:24:39 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G S H M R T P I I A G N W K M H Y T I D E A V K L V E E L K P L V K D A K C E V V V C P T F V C L D A V K K A V E G T N I K V G A Q N M H F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T
S S
G G G T T T S S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E E K G A F T G E I A P R M L E A M N I D Y V I I G H S E R R E Y F N E T D E T C N K K V K A A F A H N L T P I L C C G E T L E Q R E N G T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
T T
T T
S
S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T N D V I K A Q I T A D L E G L T K E Q A E K V V I A Y E P I W A I G T G K T A T S D Q A N E T I A A I R A M V A E M F G Q E V A D K V R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
G G G T T S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence Q Y G G S V K P N T I A E Q M A K S D I D G A L V G G A S L V A A D F A Q I V N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T S T T
G G G G S T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	H	M	R	T	P	I	I	A	G	N	W	K	M	H	Y	T	I	D	E	A	V	K	L	V	E	E	L	K	P	L	V	K	D	A	K	C	E	V	V	V	C	P	T	F	V	C	L	D	A	V	K	K	A	V	E	G	T	N	I	K	V	G	A	Q	N	M	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												S																			T	T		S	S								G	G	G								T	T	T	S	S						S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	K	G	A	F	T	G	E	I	A	P	R	M	L	E	A	M	N	I	D	Y	V	I	I	G	H	S	E	R	R	E	Y	F	N	E	T	D	E	T	C	N	K	K	V	K	A	A	F	A	H	N	L	T	P	I	L	C	C	G	E	T	L	E	Q	R	E	N	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S		S		T	T										T	T							S								S																	T	T																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	N	D	V	I	K	A	Q	I	T	A	D	L	E	G	L	T	K	E	Q	A	E	K	V	V	I	A	Y	E	P	I	W	A	I	G	T	G	K	T	A	T	S	D	Q	A	N	E	T	I	A	A	I	R	A	M	V	A	E	M	F	G	Q	E	V	A	D	K	V	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T							T	T								G	G	G	T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	Q	Y	G	G	S	V	K	P	N	T	I	A	E	Q	M	A	K	S	D	I	D	G	A	L	V	G	G	A	S	L	V	A	A	D	F	A	Q	I	V	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				T	T	T						T	S	T	T								G	G	G	G	S									T