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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4y7pA_

Fold library idPDB HeaderMoleculeTitle
c4y7pA_PDB header: hydrolaseChain: A: PDB Molecule: alkaline d-peptidase;PDBTitle: structure of alkaline d-peptidase from bacillus cereus


Added to library: Sat Oct 17 09:04:01 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QRDRNSVKQAVRDTLQLGFPGILAKTSEGGKTWSYAAGVANLSSKKPMKTDFRFRIGSVTKTFTATVVLQ
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Known secondary structure (DSSP)


GGGT
STTBS
TTT

B

TT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAEENRLNLDDSIEKWLPGVIQGNGYDDKQITIRQLLNHTSGIAEYTRSKSFDLMDTKKSYRAEELVKMG
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Known secondary structure (DSSP) TTS

TT
BGGGTSTTTS
STT

TTT
BT
S



GGGSTT

TT

S



 .........150.........160.........170.........180.........190.........200.........210
Sequence ISMPPDFAPGKSWSYSNTGYVLLGILIETVTGNSYAEEIENRIIEPLELSNTFLPGNSSVIPGTKHARGY
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Known secondary structure (DSSP) TS

SSSTTS




SS
TTTTTT
TT
B

TT




SSSB


 .........220.........230.........240.........250.........260.........270.........280
Sequence IQLDGASEPKDVTYYNPSMGSSAGDMISTADDLNKFFSYLLGGKLLKEQQLKQMLTTVPTGEAALGRYGL
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Known secondary structure (DSSP) SSSSS


SS

GGGTGGGT

TTSSS
T

B



SSS
SB
S
 .........290.........300.........310.........320.........330.........340..
Sequence GIYETKLPNGVSIWGHGGSIPGFVTFAGGTLGGKHTLAVNLNSLNAESPDPFKNILLAEFSK
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Known secondary structure (DSSP) S

TTS
TB
TTSSS
TT
S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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