PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4y7jE_

Fold library id	PDB Header	Molecule	Title
c4y7jE_	PDB header: membrane protein,transport protein	Chain: E: PDB Molecule: large conductance mechanosensitive channel protein,	PDBTitle: structure of an archaeal mechanosensitive channel in expanded state

Links to external resources
Added to library: Sat Aug 29 08:21:27 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F S E F K E F L Y E Y K V I P L A I A F I M G I A S T A L I K S F V D N I I M P I I T P F V P G G G T A L G P S W G A F L G E L V N F I I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T T T T T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A F A V F I I A K K V L Q E E K V E K K M T K K V G I V D T T F A R V D M A S I A I K K L K E L S P N I K I I R K T V P G I K D L P V A C K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
S S
S S
T T
S
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K L L E E E G C D I V M A L G M P G K A E K D K V C A H E A S L G L M L A Q L M T N K H I I E V F V H E D E A K D D K E L D W L A K R R A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
T T T T S S
T T S
S S

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence E H A E N V Y Y L L F K P E Y L T R M A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
-

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	S	E	F	K	E	F	L	Y	E	Y	K	V	I	P	L	A	I	A	F	I	M	G	I	A	S	T	A	L	I	K	S	F	V	D	N	I	I	M	P	I	I	T	P	F	V	P	G	G	G	T	A	L	G	P	S	W	G	A	F	L	G	E	L	V	N	F	I	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									T																								T	T	T	T	T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	F	A	V	F	I	I	A	K	K	V	L	Q	E	E	K	V	E	K	K	M	T	K	K	V	G	I	V	D	T	T	F	A	R	V	D	M	A	S	I	A	I	K	K	L	K	E	L	S	P	N	I	K	I	I	R	K	T	V	P	G	I	K	D	L	P	V	A	C	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	T	S										S	S		S	S												T	T		S										S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	L	L	E	E	E	G	C	D	I	V	M	A	L	G	M	P	G	K	A	E	K	D	K	V	C	A	H	E	A	S	L	G	L	M	L	A	Q	L	M	T	N	K	H	I	I	E	V	F	V	H	E	D	E	A	K	D	D	K	E	L	D	W	L	A	K	R	R	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S	S										T	T	T	T																		S	S										T	T	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	E	H	A	E	N	V	Y	Y	L	L	F	K	P	E	Y	L	T	R	M	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					-