PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4y66D_

Fold library id	PDB Header	Molecule	Title
c4y66D_	PDB header: cell cycle	Chain: D: PDB Molecule: putative tbpip family protein;	PDBTitle: crystal structure of giardia lamblia hop2-mnd1 complex

Links to external resources
Added to library: Sat Mar 21 08:19:32 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A F A A V K E L M Q T S N K P Q N V Q T A I N N T G S K Y G K T T V Q K A L D E L V A Q N L C I Y L Y L W N Q N L L E V L S D A Q L M E V N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
B
T T T S
S
S T T S
B
G G G S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A Q I N D L K A Q V E K L T Q Q G E T L R I T Q R N L E A A P I T E V L K Q E V D E L R Q Q V S A N D E K L R L V R E S N A I V S D A D M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence T L Q K N Y K D A M T A W A T R R A K C R E V I D T L S E G M G V K P S A F M D Q L G L E E G L P M T T Y T E M K K A L P P V N V A D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T
S
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	F	A	A	V	K	E	L	M	Q	T	S	N	K	P	Q	N	V	Q	T	A	I	N	N	T	G	S	K	Y	G	K	T	T	V	Q	K	A	L	D	E	L	V	A	Q	N	L	C	I	Y	L	Y	L	W	N	Q	N	L	L	E	V	L	S	D	A	Q	L	M	E	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			S		B								T	T	T	S		S		S													T	T	S					B				G	G	G	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	Q	I	N	D	L	K	A	Q	V	E	K	L	T	Q	Q	G	E	T	L	R	I	T	Q	R	N	L	E	A	A	P	I	T	E	V	L	K	Q	E	V	D	E	L	R	Q	Q	V	S	A	N	D	E	K	L	R	L	V	R	E	S	N	A	I	V	S	D	A	D	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	T	L	Q	K	N	Y	K	D	A	M	T	A	W	A	T	R	R	A	K	C	R	E	V	I	D	T	L	S	E	G	M	G	V	K	P	S	A	F	M	D	Q	L	G	L	E	E	G	L	P	M	T	T	Y	T	E	M	K	K	A	L	P	P	V	N	V	A	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																															T	T	S										T					S		S									S	S